Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_09690
Help
Entry
UGYR_09690 CDS
T03887
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UGYR_09690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yrb03400
]
UGYR_09690
Enzymes [BR:
yrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UGYR_09690
DNA repair and recombination proteins [BR:
yrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UGYR_09690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_22
TrwB_AAD_bind
AAA_19
WHD_PriA_bact
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AKA38638
LinkDB
All DBs
Position
2139983..2142181
Genome browser
AA seq
732 aa
AA seq
DB search
MSVVQVALPVPLARSFDYRLGNDMISPVIGGRVSVTFGKRKAIAIVVGLSETSDLPLEQL
KTIDQVLDNESLFPPSLWRILRWAAEYYHYPIGEVLFHALPILLRQGKPAQSAPLWQWFT
TEQGRATPPESLKRAPKQQQALAALLQKPVYRHQVNELALAESALQALRTKGLIDLRAQE
QATTDWRTHFEVLGDRLRLNTEQATAVGAIRSEDDQFAAWLLAGVTGSGKTEVYLSVLEN
ILAQGRQALILVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSVWLRARNGEAAIV
IGTRSALFTPFSRLGVIIIDEEHDSSYKQQDGWRYHARDLAVFRAREENIPIVMGTATPA
LETLHNVQLGKYRQLTLSKRAGNAKPAAQHLLDLKGLPLKVGLSQPLLQRMKDHLKADNQ
VILFLNRRGYAPALLCHECGWIAECQRCDHYYTLHQNQRQLRCHHCDSQRPVPHQCPQCG
STHIVSVGVGTEQLENELAPLFPETPITRIDRDTTSRKGSLEQALADVHQGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKKGEVILQTHH
PEHPLLQILLQQGYDAFAKLALTERQSVFLPPYTSHIIVRSEDHDNRQSALFLQQLRNLL
EASPLKDESLWIMGPVPALQAKRGGRFRWQLLLQHPSRQLLQKLIKTSQPLINTLPQARK
VKWTLDVDPIDN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttgttcaagttgcattaccggttccccttgcccgctcattcgactatcgcttg
ggcaatgacatgatcagcccggtaatcggcggacgcgtcagtgtcactttcggcaagcga
aaagcaatagctatcgtggtcggcttgagtgaaaccagtgacctgccactcgaacagcta
aaaactatcgatcaggttctggataatgaaagtttattcccgccaagcctatggcgcatt
ttgcgctgggcggcagagtattatcactatcctattggcgaagtgctatttcacgcctta
cccattttattacggcaggggaaaccggcacagtcagcgccgttgtggcaatggtttact
actgaacagggtcgggcaacgccaccggaaagtctcaaacgagcgcctaaacaacagcag
gcactggctgccctgctgcaaaaaccggtttaccgccatcaggttaatgagttggcactg
gcggaaagtgccttgcaggctttacgcaccaaagggctgattgacctgcgggcacaagag
caagccaccaccgattggcgcactcattttgaggtgctgggtgaccggctacgcctcaat
accgaacaggctactgccgtcggagccattcgcagcgaagatgaccagttcgctgcctgg
ctactggctggcgtgaccggttcaggtaaaactgaagtttatctcagcgtgctggaaaat
attctggcacagggacgccaagcgctgattctggtaccggaaattggcctgacaccgcaa
actattgcccgtttccgcgagcgctttaatgcgccagtagaagtgctgcattctggtttg
aacgatagcgagcgcctttcggtttggctacgagcgcgcaacggtgaagccgctattgtt
atcggcacacgttcagcgctatttacaccattttcacgcctgggcgtaatcattattgat
gaagaacatgacagttcgtataagcagcaggatggttggcgttatcacgccagggatttg
gccgtattccgcgccagagaagagaatatcccgatcgtaatgggaaccgccacaccggca
ctggaaacattgcataacgtacaattgggtaaatatcgccagttaactctttccaaacgc
gccggtaatgccaaaccagcggcgcaacatctgctggatttaaaagggctaccgctgaaa
gtgggtctatctcaaccgctgttacaacggatgaaagatcacttgaaagcggataatcag
gtgatcttgtttcttaaccgccgtggttatgcgcctgcgctgctgtgccatgaatgcggc
tggatcgctgaatgccagcgctgtgaccattactacactttgcaccagaaccagcgccag
ctccgttgccaccattgtgatagccaacgtcccgtgccgcatcaatgcccacaatgcggc
tccactcatatagtttccgttggggttggcaccgagcagttggaaaatgagttggcaccg
ctgtttcccgaaactccgataacacgcatcgatcgtgatactaccagccgcaaaggttca
ctggaacaagcgctggcagacgttcatcagggcggcgcacgtatcctgattggcacccag
atgttagccaaaggacaccatttccccgatgtaacactggtggctctgctggatgtagac
ggcgcgctgttctctgccgacttccgttccgccgaacgctttgctcaactgtatacgcag
gtttcagggcgcgccgggagagctggcaaaaaaggcgaggtgattttacaaactcatcat
cccgagcaccctttactgcaaattttgctgcaacagggctacgatgcctttgccaaactg
gcgttgaccgagcgtcagagcgtatttttaccgccttataccagtcatatcattgtgcgc
agtgaagaccatgataaccggcaatcggctctgttcctgcaacaactgcgcaatctgctg
gaagccagcccactcaaagacgagtctctctggattatggggccagtaccggcgttacaa
gccaaacgtggcggtcgcttccgttggcaattattgttacagcacccttcccggcaatta
ttgcaaaaactgattaaaaccagccaaccattgattaatacactccctcaagcacgaaaa
gtgaagtggacactggatgtcgatccaatagacaactag
DBGET
integrated database retrieval system
