Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_09870
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Entry
UGYR_09870 CDS
T03887
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00540
Lipopolysaccharide biosynthesis
yrb01100
Metabolic pathways
Module
yrb_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
UGYR_09870
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yrb01005
]
UGYR_09870
Enzymes [BR:
yrb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
UGYR_09870
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
UGYR_09870
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
UGYR_09870
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
UGYR_09870
Lipopolysaccharide biosynthesis proteins [BR:
yrb01005
]
Lipid A
UGYR_09870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
AKA38672
UniProt:
A0A0A5FQL2
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Position
2177445..2178722
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AA seq
425 aa
AA seq
DB search
MLLRLYQVLLYLIQPLIWLRLLLRSRKAPAYRKRWGERYGFCAGKVVAGGIMLHSVSVGE
TLAAIPLVRALRHRYPSLPITVTTMTPTGSERVQSAFGKDVHHVYLPYDLPGSVNRFLNQ
VNPKLVIIMETELWPNLINALHHRKIPLVIANARLSARSATGYKKIGGFIRNILRRITLI
AAQNQEDGERFIELGLKRSQLTITGSLKFDISVTPELAARAITLRRQWAAHRPVWIATST
HDGEEAILLEAHRQLLLQYPTLLLILVPRHPERFPKAIELTQKAGFSYTLRSASEIPSST
TQVVIGDTMGELMLLYGIADMAFVGGSLVERGGHNPLEAAAHAIPVMMGPHTFNFKDICA
KLEQAEGLITVTDVASLVKEICILLTDEDCRLYYGRHAVEVLHENQGALQRLLHLLEPYL
PPRSH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcgtttatatcaggtactcctctacctaatccaacctctgatttggctgcga
ttgttactacgcagccgtaaagcccccgcttatcgcaagcgttggggagaacgttatggt
ttttgtgctggtaaagttgtggctggcggcatcatgctgcattccgtttcagtcggcgag
actctggccgcaattcctctggtcagggcgttgcgccatcgctacccttcactacctatc
accgtcaccaccatgacaccgacgggttctgagcgggtacagtccgcttttggcaaagac
gttcatcacgtttacctgccttatgacttgccgggttcggtaaatcgcttccttaatcaa
gttaatcccaagctggttattattatggaaaccgagctatggccaaacctgattaatgcg
ctgcaccatcgcaaaattccattggttatcgccaatgcgcgtctttctgcccgatcggct
accggctacaaaaaaattggtggctttatccgtaatatattgcgtcgtatcacgctaatt
gccgcgcaaaatcaggaggatggcgaacgctttatcgaattgggcttgaagcgatcgcaa
ctcacgattaccggtagcttgaaatttgatatctcagtcacgccagaactggctgctcgg
gccattacgctccgccgccaatgggcagctcaccgtccagtatggattgcaaccagcacc
catgatggtgaagaagctattctactggaagcacatcgtcagttgttattgcaataccca
acgctgttactgattctggttccacgtcatcctgaacgcttccctaaagccatcgagctt
acccagaaagcaggtttcagctataccttgcgcagtgccagtgaaattccatccagcact
acacaggtagtgatcggtgacaccatgggtgaactgatgctgctctatggcattgccgat
atggcttttgtcggtggtagcctagttgagcgtggtggacataatccattggaagcggct
gcccatgcaattcccgtgatgatggggccgcatacgtttaattttaaagatatttgcgcc
aagcttgagcaggctgaaggcctgattaccgtgactgacgtggcatcattggtgaaagag
atctgcatattattaactgacgaagattgccgcctgtattatggtcgtcatgccgtcgaa
gttctgcacgagaaccaaggggcattacagcgattattacacttgctggagccttattta
ccgccacggagccactaa
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