Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_11450
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Entry
UGYR_11450 CDS
T03887
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UGYR_11450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yrb03021
]
UGYR_11450
03400 DNA repair and recombination proteins [BR:
yrb03400
]
UGYR_11450
Enzymes [BR:
yrb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UGYR_11450
Transcription machinery [BR:
yrb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UGYR_11450
DNA repair and recombination proteins [BR:
yrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UGYR_11450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AKA38950
UniProt:
A0A085U6T0
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All DBs
Position
2533246..2534235
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccgttagagcgtggctttggccatactctcggc
aacgcactgcgccgtattctgctttcatctatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactacatgagtacagcaccaaagaaggcgtacaggaagatatcctggag
atcctgctcaacctgaaagggctggcggtgagagttcaaggaaaagatgaagttattctt
accctgaataaatctggcattggccctgtgactgcagccgatatcacccatgatggtgat
gtcgaaatcgtcaagccgcaacatgtgatctgccacctgaccgatgaaaacgcatctatt
agtatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcgtctgcccgaattcat
tcggaagaagatgagcgcccgattggtcgtctgttagtagatgcatgctatagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ctagtcatcgagatggaaaccaatggcacgatcgatcctgaagaggcgatccgccgtgcg
gcaactatcttggctgaacaacttgaagctttcgttgacctacgtgatgtacgtcagccg
gaagttaaagaagagaagccagagttcgatccgatcttgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctt
actgagattaaagacgtacttgcttcacgtggtctgtcactaggcatgcgcctggaaaac
tggccgccggcaagtattgctgacgagtaa
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