Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_11690
Help
Entry
UGYR_11690 CDS
T03887
Name
(GenBank) mechanosensitive channel protein
KO
K22051
miniconductance mechanosensitive channel
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yrb02000
]
UGYR_11690
Transporters [BR:
yrb02000
]
Other transporters
Pores ion channels [TC:
1
]
UGYR_11690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AKA38989
UniProt:
A0A085U9G9
LinkDB
All DBs
Position
complement(2582765..2586100)
Genome browser
AA seq
1111 aa
AA seq
DB search
MRLITTLLFGLLLSMPLYAATQPNETQIRQDLKQAEANKGVANQTEIVQALQSALNWLND
AKESEGRAQQYQAVIDDFPKLTRELRKELAPESDKPLQVPTNLSTNELEQQILQTSSQLL
ELARQLQQEQDRSREISDSLSQLPQQQSEARRLLGEVTLRLQSQSHPSTPLAQAQLAQLQ
AEATARKARVNELELSQLSANNRQELSRMRSEIFKKSHERVDALLQALRNNLNNQRQQEA
EQALERTELLAEQGGDLPVAISQQLEINRTLSRELNQQAQRMDLISSQQRQAAADTLRVR
QALSTIREQAQWLGVSTALGETLRAQVARLPEIPKSQQLDRDMAQLRVQRLYYEDMLEKQ
QKTTKVTQDNGTPLTAQQQRIMDAQMRTQRELLNSLLSGYDTQILELTKLKVANSQLVDV
LSEIREATHRYLFWVADVNPISLSYPINVARDLTRLLSLDTLSQLGRAFAMMMTSKETLI
LIISALLFVGFSLSSRRHYHAFMERANSRIGKVTQDQFSLTLRTVFWSILVALPLPVLWA
ALGYGLQNAWSYPMAVAIGNGVTATVPVLWIFMISASFAHPHGLFIAHFRWSPAQVARAM
RFYRMSVWLIIPLMMALITFENYNDREFAGSLGRLCFILLCIALSLVTNSLKRAGIPLYL
DKKGSGENKVNQALWSLLISAPLIAALASLLGYLATSQALLARLETSVAIWFFLLVIYHI
IRRWMLIQRRRIAFDRAKQRRADILAQRAKGEDDTPHSNSTEGSIDVEEPVIDLDVISAQ
SLRLVRSMLTMIALVSVIFLWSEIHSAFGFLENIRLWDVSSTTNGVESIQPITMGSLLIA
ILVIIVTAQLVRNLPALLELALLQHLDLTPGTGYAISTITKYLVILFGGLLGFSMLGIEW
AKFQWLVAALGLGLGFGLQEIFANFVSGLIILFEKPIRIGDTVTIRDLTGSVTKINTRAT
TISDWDRKEIIVPNKAFITEQFINWSLSDSITRVVLTVPAPAETNSEEVTEILLTASKRC
ALVLDNPAPEVYLVDLQQGIQIFELRIYAAEMSHRMPLRHEIHQLILAGFREHDIVLPFP
PFQVRMETLGRTGRSSSSTPSRNNTRSPGSL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgataaccacactcctgtttggcctattgctctctatgccgctttatgcggca
acccagcctaatgaaacccagatcaggcaagacctgaagcaagcggaggcgaataaaggg
gtggccaatcagacggagattgttcaggcgctacaaagtgcgctcaactggctgaatgat
gcgaaagagtccgaagggcgggcgcagcagtatcaagccgtcattgatgattttcctaaa
ttaacccgagaattacgcaaagagctggcaccggagagcgataaaccgctccaggtgcca
accaatttgtcgacgaatgaactggaacagcagattctgcaaaccagcagccaactgctg
gaactggcgcgccaactgcaacaagaacaggatcgttcacgggagatcagcgactccctc
agtcaactgccgcaacaacagtcagaagcgcgtcgcttgctcggtgaagtgacattgcgg
ctacaatcgcaaagtcatccttccacaccgttagcccaagcacaactggcacaattacaa
gccgaagccaccgctcgcaaggccagagtcaacgagttagaactttctcagctctcggcc
aataatcgccaagaattatcccgcatgcgctctgaaatctttaaaaagagccatgaacgg
gtcgacgctttattgcaagcactgcgtaataatctgaacaatcagcgtcagcaagaagct
gagcaggcgctggaacgtaccgaactgttggcagagcaaggtggcgatttaccggtcgct
atcagccaacagctggaaattaaccgcacattatcccgtgagctgaatcagcaggctcag
cggatggatctgatttcctcccaacagcgccaagcggcggcggatactctgcgagttcgt
caggctctcagcactattcgcgagcaagctcaatggcttggtgtatctactgcactcgga
gaaaccctgcgggcacaggttgcccgattaccggaaataccaaaatcccaacagttggat
cgggatatggcccagctacgcgtccagcgcctgtattacgaagacatgctggaaaaacag
cagaaaacaactaaagtaacacaggataacggcacgccgctcaccgcccagcaacagcga
attatggacgcccagatgcgtacccagcgtgaactgttgaattccctgctttccggttat
gacacgcaaattcttgaactcaccaaactaaaagtagccaatagccaactggttgatgtc
ctaagcgaaattcgcgaagcaacccaccgttacctgttctgggtcgccgatgtcaaccct
atttcattatcatacccaatcaatgtcgctcgtgacctgacccgcctgctctctctggat
accctatcccagttaggtcgcgcatttgccatgatgatgaccagcaaagaaaccttgatt
ctcattatcagcgcattgctatttgttggtttcagtcttagctcacgccgccattatcac
gctttcatggagcgagccaacagccggatcggcaaagtcacacaagaccaattttcgctg
acattacgcaccgttttctggtctattctggttgcgctgccgctaccggtactttgggcg
gcattaggctacggcctgcaaaatgcctggtcctacccaatggcggtcgctattgggaac
ggcgtcactgcgacagttccagtgctatggatatttatgatcagcgcctcctttgcccac
cctcatggcttgtttattgcccatttccgttggtcgccagctcaggttgccagagccatg
cgcttttatcgcatgtcggtgtggctgattattccattgatgatggccttgattactttc
gagaattacaacgatcgcgagtttgccggtagcttaggccgcctgtgctttatactgcta
tgtatcgcgttaagtttggtgaccaatagcctgaaacgtgctgggattccgctgtacctg
gataaaaaaggctccggtgagaataaggtgaaccaggccttgtggagcttgctgatctcc
gcgccactgattgccgcactggcttcgctgctgggctatctggccacgtcacaggcgctg
ctggcacgtttggaaacctcagtcgctatttggttcttcttgctggtgatttaccacatt
atccgccgttggatgctgatccagcgccgtcgtattgcctttgatcgcgccaagcaacgg
cgagctgatattctggcgcaacgtgccaaaggagaagatgacacgccgcacagtaacagt
accgaagggtcgattgacgtagaagaaccggtgatcgatctggatgtcatcagcgcccag
tccttgcgactggtacgttcaatgctcaccatgatcgcgttggtttcagtgattttcctg
tggtcggaaattcattctgcctttggtttcctggaaaatattcgtttatgggatgtttcc
tcaacgaccaacggggtggaatcgatccagccgatcaccatgggatcattgctgatcgcc
attttggtgatcatcgttaccgcccagttagtacgcaacttaccggcgttacttgagctg
gcgttactccagcacctggatctcacacccggtactggctatgccatttctaccatcacc
aaatatctggtgattctatttggcggcctgctcggtttttctatgctggggattgaatgg
gcgaaattccagtggttagttgctgctctgggtttaggattaggttttggtttacaagag
atttttgccaacttcgtctctggcctgattattctgttcgagaaaccaatccggatcggc
gataccgtgaccatccgcgacctcactggcagtgtgaccaaaatcaatacacgcgctact
accatttccgattgggatcgcaaggaaattatcgtaccgaacaaagcctttatcactgag
cagtttatcaactggtcactatctgactcgattactcgtgtggtattgacggtacctgca
ccagcggaaaccaacagtgaagaggtcaccgaaatactgctgacggcatccaaacgctgt
gcgttggtactcgataaccccgcgccagaagtctatctggtcgatctacaacaagggatt
cagatcttcgaactgcgaatttacgccgctgaaatgagccaccggatgccactgcgccac
gaaattcatcaactgattctggctggcttccgcgagcacgacattgtgctgccattcccg
ccgttccaggttcggatggaaaccttgggccgcacgggtcgcagctccagttcgactccg
tcacgcaataacactcgctcgccaggtagcctgtaa
DBGET
integrated database retrieval system
