Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_11885
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Entry
UGYR_11885 CDS
T03887
Symbol
cpdB
Name
(GenBank) 2', 3'-cyclic nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00230
Purine metabolism
yrb00240
Pyrimidine metabolism
yrb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
UGYR_11885 (cpdB)
00240 Pyrimidine metabolism
UGYR_11885 (cpdB)
Enzymes [BR:
yrb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
UGYR_11885 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
UGYR_11885 (cpdB)
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Motif
Pfam:
5_nucleotid_C
Metallophos
PTase_Orf2
Motif
Other DBs
NCBI-ProteinID:
AKA39023
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All DBs
Position
complement(2621420..2623384)
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AA seq
654 aa
AA seq
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MEKAMIKRPLTLSLLACLVATSAQSATVDLRVLETTDLHSNMMDFDYYKDKPTEQFGLVR
TASLIDAARQQAVNSVLVDNGDLIQGSPLGDYMAAKGLKEGEIHPVYKAMNTLDYAVGNI
GNHEFNYGLDYLKKSLAGAKFPYVNANVIDVKTGKPLFQPYLIADTPVKDRDGKSHNLRI
GYIGFVPPQVMIWDKANLTGKVRVDDITETAKKWVPAMRKQGADLIIAIPHSGLSSEPYK
TMAENSVYYLSQVPGINAIMFGHSHAVFPSKDFSAIKGADIAQGTLNGIPAVMPGQWGDH
LGVVDFVLNNDSGNWQVEQAKAEARPIYDKANKKSLAAENANLVKVLADDHKGTRDFVSQ
PIGTASDNMYSYLSLIQDDPTVQIVNNAQRAYTEHFIQGDPDLADLPVLSAAAPFKAGGR
KNDPASFVEVEKGDLTFRNAADLYLYPNTLVVVKASGAEVKQWLECSAGQFNQIDVNSSK
PQSLINWNGFRTYNFDVIDGVNYQIDVTQPARYDGDCTLVNDNAERIKNLTYNGKPIDPK
ATFLIATNNYRAYSGKFAGTGDSHIAFASPDENRSVVSAYISAETKKNGQVKPQADNNWH
LAEIVSSQPLDIRFETSPSAKAAKFIKQKAQYPMKPMGTDDIGFEVYQVDLQKK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagccatgataaagcgtcccctgacgttatccctactcgcttgcctggttgca
acctctgctcagagtgctaccgttgatttacgcgtattggagaccaccgacctccatagc
aacatgatggatttcgattactataaggataaacctaccgaacagtttggcttggtacgt
actgccagcctgattgatgccgcacgccaacaagcagtaaacagcgttctggtagataac
ggtgatttgatccagggtagcccgcttggggattacatggcagccaaaggcttgaaggaa
ggagagattcatcccgtttataaagcgatgaatacactggattatgccgtaggaaacatt
ggtaatcacgaatttaactatggcctggattatctgaagaaatcgctggctggtgcaaaa
tttccctatgtcaatgccaacgtcattgacgtaaaaaccggtaaacccctattccagcct
tacctgattgccgacacaccggtcaaagatcgcgatggaaaaagccacaatctacgtatc
ggttatatcggttttgtaccgccgcaggtcatgatctgggataaagccaatctgaccggc
aaagtccgggtggatgatattacggaaaccgccaaaaaatgggtaccggcaatgcgcaag
cagggggcggatttgattatcgcgatcccacactccggtttatccagcgagccatacaaa
actatggctgaaaactcagtgtattacctcagccaggttccgggaataaacgccattatg
ttcggccactcccacgcggtattcccaagtaaagattttagcgctatcaaaggcgcggat
attgcacaaggcactttaaacggtattcctgcggtgatgccaggccaatggggtgaccat
ctcggcgtagtggattttgttctgaataatgatagcggcaattggcaagttgaacaggcc
aaggctgaagcgcgccctatctatgataaagccaataaaaaatcgctggccgcagaaaat
gccaatttggtcaaagtgctggccgatgatcataaaggaacccgcgatttcgttagccaa
ccgatcggtacagcgtcagataatatgtatagctatctgtcactgatccaggacgatcca
accgtgcagatcgtcaacaatgcgcaacgcgcctataccgaacactttattcaaggcgac
ccggatttggccgatttaccggtactttctgctgccgctccgtttaaagccggtggccgc
aaaaacgatccggccagttttgttgaagtcgaaaaaggcgatcttaccttccgcaatgct
gcagatttatatctctatcccaacacgctggtagtcgtaaaagccagcggagcagaagtg
aagcaatggctggaatgttctgccgggcaattcaaccagattgacgtcaatagcagcaaa
ccacagtctctgattaattggaatggcttccgcacctataactttgatgtgattgatggt
gttaactatcaaattgatgtcacacaaccagctcgttatgacggcgactgtacgctggtc
aatgataacgctgagcgcatcaaaaatctgacctacaacggcaaaccaatagatccaaaa
gccacgttcctgatcgccactaataattatcgggcttacagcggaaaatttgccggcact
ggcgatagccatattgccttcgcctcaccggatgaaaaccgttcagtagtttctgcctat
atcagtgccgaaaccaaaaagaatgggcaggtaaaacctcaggccgataataattggcat
ctagctgaaattgtcagctcgcagccactggatatccgctttgaaacctctccaagcgct
aaagcagcaaagtttatcaaacaaaaagcccagtatccgatgaagcccatgggtacagat
gacataggttttgaggtttatcaggtggatttacagaagaaataa
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