Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_12060
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Entry
UGYR_12060 CDS
T03887
Symbol
nusA
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yrb03021
]
UGYR_12060 (nusA)
03009 Ribosome biogenesis [BR:
yrb03009
]
UGYR_12060 (nusA)
Transcription machinery [BR:
yrb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
UGYR_12060 (nusA)
Ribosome biogenesis [BR:
yrb03009
]
Prokaryotic type
rRNA transcription factors
UGYR_12060 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AKA39055
UniProt:
A0A085U9A1
LinkDB
All DBs
Position
2656187..2657674
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AA seq
495 aa
AA seq
DB search
MNKEILAVVEAVSNEKSLPREKIFEALETALATATKKKYEQEIEVRVSIDRKTGDFDTFR
RWVAVDEVTMPTREITLEAAQFEDPSTQLGDYVEDQIESVTFDRITTQTAKQVIVQKVRE
AERAMVVEQFRQYLGEIVTGTVKKVNRDSIALDLGNNAEAVIGREDMLPRENFRPGDRIR
GVLYDVRPEARGAQLFVSRSRSEMLIELFRIEVPEIGEELIEIKAAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSSELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE
DRHTMDVAVEASNLAQAIGRNGQNVRLASQLSGWELNVMTADDLQAKHQAEAHAAIDTFT
KHLDIDEDFATVLVEEGFSSLEELAYVPIKELLEIDGLDEDMVEALRDRAKAALTTLALA
QEESLGDQKPADDLLNLEGLERSMAFKLAARGVCTLEDLAEQGIDDLADIEELSDEQAGE
LIMAARNICWFGDNA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagattctggctgttgtagaagcagtttccaatgagaaatcccttccgcgc
gagaagatttttgaagcgttggaaaccgctctagcgacagcgaccaagaaaaaatacgaa
caagaaattgaagttcgcgtcagcatcgatcgtaaaacgggtgatttcgatacattccgt
cgttgggtcgctgtcgatgaagtcactatgccaacgcgtgaaatcacgctggaggccgct
cagtttgaagatccaagcactcaactgggcgattatgttgaagatcagattgaatctgtc
acctttgatcgcatcactacacaaactgccaagcaggttatcgtacagaaagtacgtgaa
gccgaacgcgctatggtggttgaacaattccgtcagtatttgggcgaaatcgttactggt
acggttaagaaagttaaccgtgacagtattgctctggacttgggtaacaacgctgaagcg
gtgattggccgtgaagatatgttgccacgtgaaaacttccgtccgggtgaccgtattcgc
ggtgtcctgtacgatgtgcgtccagaagctcgcggtgcccagctgttcgtcagccgctca
cgctctgaaatgctgattgaactgttccgcattgaagtgccagaaattggtgaagagttg
atcgaaattaaagccgcagcccgtgatccgggttctcgtgctaagattgcggttaaaacc
aacgataaacgtattgacccagtaggtgcctgtgtaggcatgcgtggtgcgcgagttcag
gctgtttccagcgaacttggtggcgagcgtatcgatattgtattgtgggatgataatcca
gctcagtttgttatcaatgccatggcacccgctgacgttgcttcaatcgttgttgatgaa
gatcgacacacgatggatgttgctgttgaagctagcaatctggctcaggcgattggtcgt
aacggtcaaaacgtccgtttggcctcacagcttagtggctgggagctgaacgttatgacg
gcggatgatcttcaggcgaaacatcaggctgaagctcatgcggctatcgatacattcacc
aaacatcttgatattgatgaagatttcgccactgtattggtcgaagaaggtttctcttcc
ctggaagaattggcttatgtgccaatcaaagaacttttggaaatcgatggccttgatgaa
gatatggtagaagcgctgcgcgatcgcgctaaagctgcattgaccacgctggccctggca
caagaagaaagtcttggcgatcagaaacccgcagatgacctactgaacctggaaggtctg
gaacgtagcatggcatttaaattggctgcgcgcggtgtgtgtacgctggaagatcttgcc
gagcagggtatcgacgatctggcagatattgaagagcttagcgatgagcaagctggcgag
ctgattatggccgcacgtaatatctgttggtttggcgataacgcgtaa
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