Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_12075
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Entry
UGYR_12075 CDS
T03887
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yrb03016
]
UGYR_12075 (truB)
Enzymes [BR:
yrb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
UGYR_12075 (truB)
Transfer RNA biogenesis [BR:
yrb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UGYR_12075 (truB)
Prokaryotic type
UGYR_12075 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AKA39058
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All DBs
Position
2660853..2661797
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AA seq
314 aa
AA seq
DB search
MGRPRRRGRDINGVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVIARLGQRTDTSDAEGALISERDINFTQGQLDAALESFRGDTQ
QVPSMYSALKHQGKPLYEYARQGIEVEREARDITVYELQFLRWEGTELELEIHCSKGTYI
RTIIDDLGELLGCGAHVSYLRRLQVATYPSDRMVTLEQLSAMVALAQAEERSPNPELDKL
LLPMDSAVLNFPEVNLLPIVAAYVKQGQPVQVAGAPTEGMVRMTEGEERNFIGIGIIADD
GRVAPKRLVVEYTE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtccacgtcgtcgcggccgtgatattaacggcgtcctgttgttggacaaaccg
ttaggcctttcatccaatgacgttttgcagaaagtgaagcgtcttttcagtgccaaccgg
gccggtcatactggtgcattggatccattggcaaccggtatgctgccaatctgtctgggc
gaagcgaccaaattttcccaattcctgctggattctgataaacgctaccgcgtaattgcc
cgcctgggccaacgaaccgatacctctgatgcagagggtgcgttgatcagtgagcgagat
atcaattttacgcagggacagttggatgccgcactggaaagtttccgcggtgatacccag
caagtcccttccatgtactctgcgctgaaacatcagggcaaaccgttatacgagtatgct
cgtcaggggattgaagttgagcgcgaagcccgtgatatcacggtctatgagctgcaattt
ctccgttgggaaggcaccgagctggagctggaaatccattgttccaagggcacctatatt
cgaactatcattgatgatttgggcgaattgctaggttgtggtgctcatgtcagttatctg
cgccgcttacaggtggcgacttatccgagtgatcggatggtaactctggagcagctaagc
gcaatggttgcattggctcaggccgaagagcggtcacctaatccggaattggataaactg
ctgctgccaatggatagcgcagtgttgaattttccggaagtgaatttgttgccaatcgtt
gccgcttatgtgaagcaaggccagccagttcaagtggcaggtgcaccaaccgaaggtatg
gtgcggatgacggaaggtgaagagcgcaatttcattggcattggtattattgccgatgat
ggccgggtcgcaccgaaacgtttggtcgtggaatacacagagtaa
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