KEGG   Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_12270
Entry
UGYR_12270        CDS       T03887                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
yrb  Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:yrb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:yrb02048]
    UGYR_12270
Enzymes [BR:yrb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     UGYR_12270
Prokaryotic defense system [BR:yrb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   UGYR_12270
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 Helicase_C DEAD HSDR_N DUF4145 SLFN-g3_helicase UvrD-helicase AAA_19
Other DBs
NCBI-ProteinID: AKA39093
LinkDB
Position
2704077..2707586
AA seq 1169 aa
MNKSNFDFLKGVNDFIYAIACAAENNYPDDPNTTLIKMRMFGEATAKHLGMLLDIPPCEN
QHDLLRELGKIPFVDDSILSIFHKLRRIGNQAVHEYHNDLDDAQMCLRLGFRLSVWYYRL
VTKDYDFALPIFVLPERGESLYHQEVLALKQQLEQQAKEKVQSQAEIDAQQQKMIALNGY
IAILEGKQHETEEQSKARVSALEAQLASKDAELAKQTEQERKAYHKEITNQATKRTLDLS
EEESRFLIDAQLRKAKWQADSKTLRFSKGARPEPGVNKAIAEWPTGKDENGNPGFADYVL
FVGLKPIAVIEAKRKNTDVSGKLPESYRYSKYFDNAYLREMLLEHNSPDEVNEAVPEYEV
SWKDTSGSQQFKIPFCYSTNGREYRAAIKTKSGIWYRDVRHTANMPKALPEWHQPEELVA
MLGCDPQKQNQWFADNPSMSELGLRYYQEDAVRAVENAIVAGKQEILLAMATGTGKTRTA
IALMFRLIQSQRFNRVLFLVDRRSLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPEDS
TKIHVATVQSLVKRTLQSDEPMPVGRYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVS
AYRRILDHFDAVKIALTATPAIHTIDIFGEPIYRYTYRTAVIDGYLIDQDPPIKITTRNA
QDGVYLAKGEQVERLNPQGEVINDTLADDQDFEVADFNRGLVIPAFNRAVCGELAKYLDP
TGQQKTLVFCVTNSHADMVVEELRAAFKEQHPQLEHDSIIKITGDADKDAKKVQTMITRF
NKERLPNIVVTVDLLSTGVDIPSICNIVFLRKVKSRILYEQMKGRATRLCPAVGKTSFKI
FDCVDIYSTLESVDTMRPVVIRPKVELKTLVNEITDSETYKITEADGRSYAEHSHEQLVA
KLQRIISLAMYNRDRSESVDKQIRRLDELCQDAAGVGFGSLAMRLREKGPQWSAEIFNKL
PGFIARLEKLKADINALRDAPIFLDIDDEVISVKSLYGDYDTPQDFLEAFDELVKRAPNA
QPALQAVINHPRDLTRKGLVELQEWFDRQHFEESSLRSAWKETRNEDIAARLIGHIRRAA
VGDALKPFDERVDHALERIKGENDWNSEQQAWLDRLATALKEKVVLDDDVFKTGNFHRRG
GKVMLQRTFDDGLDSVLDKFSDYIWDQLA
NT seq 3510 nt   +upstreamnt  +downstreamnt
atgaataaatccaacttcgatttcctgaaaggcgttaatgactttatttacgctattgcc
tgcgcagcagaaaataactacccagacgaccccaacaccactcttataaaaatgcgcatg
ttcggcgaagctacagccaaacatctgggtatgttattggatattcctccttgcgagaat
cagcatgatctactgcgtgagctgggtaagattcctttcgttgatgacagcatactctca
attttccataagctacgccgcatcggtaatcaggcagtccatgaataccataatgatctg
gatgatgctcagatgtgcttgcggcttggttttcgtttgagcgtttggtactaccgcctg
gtaactaaagattatgacttcgcgctgccaatatttgttctgcctgaaaggggtgagagc
ctctatcatcaggaggttttagcactcaagcagcaactggaacaacaggcaaaagaaaaa
gtacaaagccaggccgagatagatgctcagcagcaaaaaatgatcgcgctgaacggttat
attgccattctggaaggcaaacagcatgaaacagaggagcagtcgaaagcgcgtgtttct
gccctggaggcacagttagcatcaaaagatgcagagctggcgaaacagactgagcaggag
cgtaaggcctatcataaagagatcaccaaccaggcaacaaaacgcacactggatctgagt
gaagaagaaagccgtttcctgatagacgctcaactgcgcaaagctaaatggcaggctgac
agtaaaacattacgcttttctaaaggtgctcgccccgagccaggtgtgaacaaagcgatt
gctgaatggccaaccggtaaagatgaaaatggtaatccaggctttgcagattatgtattg
tttgtgggtctcaaacccattgccgtcattgaagccaaacgtaaaaatacagatgtttct
ggcaaacttcctgagtcatatcgctacagtaaatactttgataatgcctacctgcgtgaa
atgctgcttgagcacaattcacctgatgaggttaatgaagccgttccagaatatgaggtt
agttggaaggacaccagcggcagtcagcaattcaaaattcccttctgttattcgactaat
gggcgtgaatacagggcggcgataaaaacaaaaagtggtatttggtatcgggatgttcgt
cacactgcgaatatgccaaaagctctgccagagtggcatcagccggaagagctcgtggct
atgttaggctgcgatccacagaagcaaaatcaatggtttgctgataatccgagtatgagc
gaattggggcttcgctactatcaggaggatgccgttcgcgcagtagagaacgcgattgtt
gcaggcaagcaagaaattttactggccatggcgaccggtaccgggaaaacccgtactgct
atcgcattaatgtttcgcctgatccagtcccagcgctttaatcgtgtgttgttccttgtt
gaccgtcgctcacttggtgaacaggctctgggggcgtttgaagatacacgtatcaacggg
gatacttttaacagtattttcgacataaaaggtctgacggataaattcccggaagacagc
accaaaattcacgttgctacagtccagtcactggttaaacgtaccctacagtcagatgaa
ccaatgccggtgggccgttatgattgcatcgtggtggacgaagcgcatcgtggctacatt
ctcgataaagagcagaccgaaggtgaactacagttccgcagccagctggattatgtttcg
gcataccgtcgtattctcgatcatttcgatgcggtaaaaattgcccttaccgccactcct
gccatacatacaatcgatatcttcggcgaaccgatttatcgctatacctaccgtactgca
gtgatcgacggttatctcatcgatcaggatccaccgattaaaatcactacccgcaatgct
caggatggcgtgtatttggcgaaaggtgaacaagtggaacgtctgaacccgcaaggtgaa
gtgatcaacgacacactggcagacgatcaggattttgaagttgcagattttaaccggggt
ctggttatccctgcttttaaccgtgcagtttgcggtgagttggctaaatacctggacccg
acgggtcaacaaaaaacactggtcttctgtgtcaccaacagccacgcagatatggttgta
gaagagctacgtgcagcatttaaagaacagcacccacagctggaacatgactcaatcatc
aagatcactggcgacgccgacaaggacgcgaagaaagtgcagacgatgatcacacgcttc
aataaagagcggttgccgaatattgtagtcacagtggatctgctgagtactggcgtagat
atcccgtctatctgcaatatcgtgtttctgcgcaaggtaaaaagccgcatcctttacgag
caaatgaaaggccgcgctactcgtctttgcccggcggtgggtaaaaccagcttcaagatt
ttcgactgcgtggacatctacagcactctggaaagtgtagacactatgcgcccggtggtg
attcgcccgaaggtggaactgaaaacgctggtcaacgaaatcaccgactccgaaacgtac
aaaatcaccgaagcggacggtcgcagctacgccgagcacagccatgagcagttggttgcc
aaactgcagcgtattatcagcctggcaatgtataaccgagaccgcagcgaatcagtggat
aagcagatacgccgcttggatgaactttgtcaggatgctgctggcgttggtttcggcagt
ctggcaatgcgcttgcgtgaaaaagggccgcagtggagcgcggaaatattcaacaagttg
ccaggatttatcgcccgattggaaaaattgaaggctgatattaatgccctgcgcgatgcg
cccatcttcctcgatattgatgacgaggtgatcagcgtgaaatccttgtacggtgattac
gacacgccgcaggatttcctggaggcctttgacgaactggtaaaacgagcccctaatgcc
cagcctgcactccaggccgtaatcaatcatccacgggatctcactcgtaaaggtctcgtt
gagctacaagaatggtttgaccgccagcactttgaagagtcatcgttgcgcagcgcgtgg
aaagagacacgtaacgaggacatagccgcaagacttatcggccatatccgtcgtgcagct
gtcggtgatgcgttaaagccttttgatgaacgcgtggatcacgccctggaacggattaaa
ggcgaaaacgattggaacagcgagcagcaggcctggctcgatcgtttagctacagcactg
aaagaaaaagtcgtgctcgatgacgatgtgttcaaaaccggtaatttccatcgtcgcggc
ggtaaggtgatgctgcaacgcacctttgatgatggtcttgatagcgtgctggataaattc
agcgattacatttgggaccaactagcctga

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