KEGG   Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_12300
Entry
UGYR_12300        CDS       T03887                                 
Name
(GenBank) restriction endonuclease
  KO
K07452  5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
Organism
yrb  Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:yrb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:yrb02048]
    UGYR_12300
Prokaryotic defense system [BR:yrb02048]
 Restriction and modification system (R-M system)
  Type IV R-M system
   UGYR_12300
SSDB
Motif
Pfam: AAA_5 AAA AAA_22 AAA_7 AAA_19 CarD_C Sigma54_activ_2 AAA_16 PqqF-like_C_4
Other DBs
NCBI-ProteinID: AKA39099
LinkDB
Position
complement(2721855..2723930)
AA seq 691 aa
MDLVDSIEADKLTLSELIDTLAEDESYETSKWNQRYREFTALLQQAPTFMGPETDDLVKR
LWYERDNGIASIRQGVPSLAEYQQSLPLLRELTERIRQQPDEATYQHVGNALQHAKETGL
LKRMYWSLRNRVFAAFSPETCTSTVDENAFNKAAEFLNKQFHLGLVLTGNWLQKNHELKQ
AIHAQSPNADPYYVNMAIWHFYELLRERDNEQKQEKVSSNTSTASSELTEIKTLAHSPTN
VIYFGPPGTGKTFTLQQKMKEYTSHAVPADRDAWLDSRLESLNWMQVIALVLLDLGKRAK
VRQMTEHQWFQRKALLNGRSSNFSQTAWATLQSFTIPGSTTVAYKGRREPAIFDKTADSE
WFLVESQLEQVDELFSLYAELKQGPKSAEAIQRFAVVTFHQSYGYEEFIEGIRARSDESG
NISYPIEPGIFMRLCQRANADPAHRYAIFIDEINRGNISKIFGELISLIEVDKRAGMSNA
MSLQLSYSGDHFSVPANVDIIGAMNTADRSLALMDTALRRRFDFVEMMPDLSLLSGTKVK
GIELESLLEKINSRIEALYDREHTLGHAFFMPVKNALNAGDEEAAFKQLKIAFQKKIIPL
LQEYFFDDWNKIRLVLADNQKQDDSLQFVIEKTDDLDTLFGNNHALRRHDQQSTAYELEA
FDEEIWNMPQAYRAIYQPQQTTLNERAVNHE
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggatcttgtggatagtattgaagcagacaaactgacactcagtgaattgattgatacc
ctagccgaagatgaaagttatgaaacatccaagtggaatcagcgatatcgtgaatttacg
gcgctgctacagcaagccccaacattcatggggcctgaaacggatgatttagtcaaacga
ctttggtatgaacgtgataacggtatcgccagcattcgtcagggagttccgtctttggcg
gaatatcagcaaagcctaccactgctcagagaattaaccgagcgtattcgccagcagccg
gatgaagcaacttaccaacatgttggcaatgctctacagcatgctaaagagaccggactt
ctgaagcgtatgtattggagtttgagaaatcgtgtctttgccgcgttttcgcctgaaacc
tgcaccagtactgtggatgagaatgcttttaataaagcggcagaattcctaaataagcaa
ttccacctcggtttggtactgaccggaaattggttacagaaaaatcatgaattgaaacaa
gccatacatgcccaatctcccaatgcagatccttattacgtgaatatggctatttggcat
ttctatgaattgctccgtgaacgcgataatgaacaaaagcaggagaaagtgtccagcaac
acatcaacagccagtagtgaactcaccgaaattaagaccctcgcacattcaccaactaac
gtgatctactttggtccaccaggcactggcaagaccttcacattgcagcaaaagatgaaa
gagtatacctctcatgctgtaccagccgatcgtgatgcctggctggattctcgccttgaa
tcgttgaactggatgcaggttatagcgctggtgttgctcgatcttgggaaacgagccaaa
gttcgccaaatgacagaacatcagtggtttcaacgcaaagcgctactgaatggccgtagt
agcaacttttcgcaaactgcttgggcgacgttgcaatccttcaccataccagggtcaact
actgttgcttacaaaggtcgtcgtgaacctgcaatctttgacaaaactgcagatagtgaa
tggttcttggttgaatctcagttagagcaagtggatgagctgttttctctttatgcagag
ttaaagcaaggtcctaaatctgccgaagccatccagcgttttgcagtggttactttccac
caatcttacggctatgaagaatttattgaaggtatccgcgcgcgctctgacgaaagtggc
aatatctcttaccctattgagccggggatctttatgcgcctgtgtcagcgagccaatgcc
gatccagcacatcgctacgccattttcattgatgagatcaatcgtggcaacatctccaag
atctttggcgaattgatctcgctcattgaagtagacaaacgtgcaggtatgtccaatgca
atgagcctgcaactgtcttatagcggtgatcacttcagcgtacccgccaatgtcgacatt
attggagccatgaatacagcagaccgttctttagctctgatggacacagctttgcgccgt
cgctttgactttgtcgagatgatgccagatctctcgttgttgagtggaactaaggtgaaa
ggcatagaactcgagtcgttgttagagaaaatcaacagccgcatcgaagcactttacgat
cgagaacatacgctagggcatgcgttctttatgccggttaaaaatgcactcaatgccggt
gatgaagaggctgcatttaaacaactgaagatcgcattccagaaaaagatcattccgctg
ttgcaggaatacttcttcgatgactggaacaagatccggctggtgctggcagacaaccaa
aagcaagacgacagcctacaattcgtgattgagaaaaccgacgatctagatacgcttttt
ggtaacaatcatgctttacgacgccatgatcagcaatcgacagcttacgagctcgaagca
tttgatgaagagatctggaatatgccacaagcttaccgtgctatttaccaaccccagcag
accactcttaatgagcgggcagtaaaccatgagtga

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