Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_12780
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Entry
UGYR_12780 CDS
T03887
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yrb03400
]
UGYR_12780
DNA repair and recombination proteins [BR:
yrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UGYR_12780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
GvpD_P-loop
RecA
AAA_22
SLFN-g3_helicase
AAA_14
Rad51
NTPase_1
ABC_tran
AAA_16
AAA
AAA_24
nSTAND3
AAA_5
cobW
Zeta_toxin
Viral_helicase1
DUF7125
AAA_29
DZR
NACHT
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKA39178
UniProt:
A0A085UBL3
LinkDB
All DBs
Position
2825545..2826927
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AA seq
460 aa
AA seq
DB search
MAKAPKRAFVCNECGADYPRWQGQCSACNAWNTITEVRLAATTPSSRNDRLGGYAGDAGI
SRVQKLSDISLDELPRFTTGFLEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQVLCKLS
ENMKTLYVTGEESLQQVAMRAHRLGLPTANLNMLSETSIEQICLIAEQEQPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VMLDGDGDSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMSNPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVFV
NVVGGVKVTETSADLALLMSLVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFKRAIVPYANMPKKPLPNMQVFGVKKLADALAVLDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaagcaccaaaacgcgcatttgtttgtaatgagtgcggcgcagattacccgcgc
tggcaggggcaatgtagtgcctgtaatgcctggaataccattaccgaagtgcgtctggct
gcgacaacgccttcttcacgcaacgatcgtctgggtggctatgcgggtgacgcgggaatt
agccgggtacagaaactatcagatatcagtttggacgaattaccgcgcttcactaccggt
tttcttgagtttgaccgagtactgggcggtggcgtcgtgcccggcagtgccattctcatt
ggtggtaatcccggtgccgggaaaagtacactattgttacaagtattgtgcaagctgtcc
gaaaacatgaaaaccctgtatgtcaccggcgaagaatcactgcaacaggtcgcgatgcgt
gcccatcgtttgggattgccgaccgccaatttgaatatgttatctgaaaccagtattgaa
cagatttgcctgattgccgaacaggaacagccaaaactgatggtgatcgactccattcag
gtgatgcatatggcggatattcaatcttcgccaggcagcgtggctcaggtgcgtgaaact
gctgcctatctgacgcgttttgccaaaacccgtggcgtcgctatcgtgatggttggtcat
gtcaccaaagatgggtcgctggctgggccgaaagtattagagcactgtattgactgctcg
gtcatgttggatggcgacggcgactcccgttttcggacgttacgcagccataaaaaccgt
tttggtgcggtcaatgagctgggcgtgtttgccatgaccgaacaaggcctgcgtgaagtc
agcaacccgtcggctattttccttagccgtggcgatgaagtgacctcgggtagctcggtg
atggtggtgtgggaaggaactcggccgctgttggtagagattcaggcgctggtggatcat
tcgatgatgtccaacccgcgccgggttgccgttggtctggaacagaatcgactggcgatc
ctgctggcggtattgcatcgtcacggcgggttacagatgtcggatcaggatgtcttcgtt
aacgtggtcggcggtgttaaggtcacggaaaccagtgcagacctggcgctattaatgtca
ctggtatccagcctgcgggatcggccgttgccgcaggatttggtggtattcggtgaagtg
gggctggcgggtgagattcgtccagtacccagtggccaggaacgtatttctgaagcggcc
aaacacggatttaaacgagcgatagtgccatatgccaatatgccgaagaaaccgctgccg
aatatgcaggttttcggggtcaagaaactggcggatgcgttggcggttttagacgatctg
tag
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