Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_12810
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Entry
UGYR_12810 CDS
T03887
Name
(GenBank) lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yrb01011
]
UGYR_12810
Enzymes [BR:
yrb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
UGYR_12810
Peptidoglycan biosynthesis and degradation proteins [BR:
yrb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
UGYR_12810
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GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
SLT_4
Motif
Other DBs
NCBI-ProteinID:
AKA39182
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Position
2834746..2836665
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AA seq
639 aa
AA seq
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MDKWRYLAIGVCLATASGVASADSLDAQRQRYQQVKQAWDSNQMATVEQLLPTLRNYPLY
PYLEYRQLTQDLSQISPAQISDFLSRNPTLPPARSLSSRFVNELARREDWRGLLSFSPQA
PKPVAARCNYYYAKWATGEQQVAWDGASDIWLNGQSLPGSCDKLFTVWQQAGHQTPLVTL
ARMRLALKESNASLVSFLLKQLPDDYQTMGTALAKLQSDPTSVESFARTVGPTDFTRSAT
TIAFTRLARQDVENARAMIPILARLQKMSDKEKLELEEAVAWRLMGNDATDQQAKWRDEV
TLRSHSSLLLERRIRMALGSGDRKSLQAWLARLPSDAKDKDEWRYWRATLLIDQGNKTEG
EAMLRELTNARGFYPMVAAQKLNIPYPIMVEVATKPDASLAKLPEIARVRELMYWNMDNL
ARNEWSYLVASRSKPEQEALARYAFEQKWADLSVQATIVAKLWDHLEERFPLAWPQEFRR
ATEGKGITPSYAMAIARQESAWNPKAQSPVGAAGLMQVMPRTADHTVKLNNISGYVNSSQ
LLDPVTNIAIGTSYLEEVYQQFGRNRILASAAYNAGPSRVNTWLGNSGGQVDAVAFIESI
PFSETRGYVKNVLAYDAFYRHFMNRPAKVLSDAELQRRY
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtggcgatatctggcgattggcgtatgtctggcgacggcatcaggagtggct
tccgcagattctcttgatgcccagcgacagcgctatcaacaagttaaacaggcgtgggac
agcaatcagatggcgacggtggaacaattattaccgacgctgcgtaattatcccctgtat
ccgtatctggaatatcgtcaattaacgcaggatctcagccagatcagtccggcacagatc
agtgattttctcagccgaaacccgacgctaccaccggcacgctctctttcttcccgcttt
gtgaatgaactggctcgtcgtgaggattggcgtgggttattgagttttagtccgcaggca
cccaagccggttgccgctcgctgtaactactattatgccaagtgggctacgggtgagcag
caggtggcttgggacggcgccagtgatatctggttaaacggtcagtcattgccgggaagc
tgcgataagctgtttacggtttggcagcaggctgggcatcaaacgccgctggtgacactg
gcgcgtatgcgtctggcactgaaagaaagcaatgccagcctggtgagtttcctgttgaaa
cagttacccgatgattatcaaaccatgggaacggcgctggctaaactacagagcgatccg
accagtgtggaaagttttgcccgcaccgtcgggccaaccgattttacccgttcggccacc
acaattgcctttacccgtttggccagacaggatgttgaaaatgctcgagccatgatcccg
atattggcacgactgcaaaagatgagcgacaaagagaagttggagctggaagaagcggtt
gcctggcgtttaatgggcaatgacgccactgatcaacaagccaaatggcgtgatgaagtg
acgttgcgcagccattccagcctgttgctggaacgccgtatccgtatggcactgggaagt
ggcgatcgcaaaagtttgcaagcttggctggcgcgtttgccatcggatgcgaaagacaag
gacgaatggcgttactggcgtgccacgttactgatcgatcaaggcaataaaactgaaggg
gaggcgatgctgcgtgagttgaccaacgcccgtggattctatccgatggtagcggcgcag
aagctgaatattccttatccaattatggtggaagttgctaccaaacctgatgcctctttg
gctaagttgccggaaattgcccgggtacgtgagctaatgtattggaatatggataatctg
gcccgtaatgaatggagctatctggttgccagccgcagtaaaccggagcaggaagctctg
gcgcgttacgcgtttgagcagaaatgggctgatctgagcgtacaagccacgattgttgcc
aaactttgggatcatctagaagaacgcttcccgctggcttggccacaggagttccgtcgg
gctacggaaggtaagggtatcacgccaagctacgcgatggcgattgcgcggcaggaaagt
gcctggaatcccaaagctcagtcaccggttggtgctgctggcttgatgcaagtcatgccg
agaaccgcagatcatacggtaaaactgaataatatcagtggctatgttaatagcagtcaa
ttgctcgatccggtcacaaatattgcaattggtaccagctatctggaagaggtttatcag
cagtttggccgcaaccgcattttggccagtgcggcttataatgctggtccgtcacgggtg
aatacctggttgggaaacagtggcggacaagtggatgccgtggcttttattgagagtatt
cctttctctgaaacccgtggttatgtcaaaaatgtgctggcctatgacgctttttatcgc
cactttatgaatcgtcccgctaaagtgctgagtgatgcggagttgcagagacgttattga
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