Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_13005
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Entry
UGYR_13005 CDS
T03887
Name
(GenBank) LPS biosynthesis protein
KO
K04744
LPS-assembly protein
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yrb02000
]
UGYR_13005
Transporters [BR:
yrb02000
]
Other transporters
Pores ion channels [TC:
1
]
UGYR_13005
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GFIT
Motif
Pfam:
LptD
LptD_N
LptD_2
Motif
Other DBs
NCBI-ProteinID:
AKA39217
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Position
complement(2881389..2883740)
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AA seq
783 aa
AA seq
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MKKRFPTLLATLIWTALYSQQSLAGLAEQCMFGVPTYDKPLVTGDTNQLPVNIQADKTEA
NYPDSAVFTGNVIVEQGNSTLTANQVQLHQTQESGQPVPVRTVTAIGDVNYDDPQIILKG
PKAWSNLNTKDTNMDKGNYQMVGRQGRGDADLMKQRGQNRYTILENGTFTSCLPGDNSWS
VVGSEVIHDREEEVAEIWNARFKIGPVPIFYSPYMQLPVGNKRRSGFLIPNARYSTNTGL
EFFLPYYWNIAPNFDATITPHYMEKRGTQLQNEFRYLLAPGSGTMALDWLPSDREYKSLD
PVNNDKARWLYYWGHSGVMDQVWRFNIDYTKVSDPRYFSDFTSLYGSSTDGYATQIFSVG
YAQENWNATLASKQFQVFTDAGNANAYRAQPQLDLNYYKNDIGPFDLHVYGQVAKFTSVN
PNNPKADRYHIEPALNLPLANGWASINTEAKLLATHYQQDIPTGFANSYAPELKDSVNRV
LPQFKIDGKMVFDRQMDWAENYTQTLEPRAQYLYVPYRNQDDIYLYDTTLLQTDYSGLFR
DRTYSGLDRIASANQIATGLTSRIYDDALVERFNVSLGQIYYFSRSRTGDENKNQTNIDN
SDDTGSLVWAGDTYWKITDKWGFRGGAQYDTRLGSLTQGNTVMEYRHNAETVLQLNYRYA
SPEYIQAAVPKVRSKGYQEGISQVGAVASLPLADRWAIVGSYYYDTKANQPASQLVGVQY
NTCCWAVNLGYERKINGWNTLDNTSKYDNKISFNVELRGLSSDHSLGTQQMLRSGILPYQ
SAF
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagattcccaacactgctggccacgttgatatggacggcactctatagccaa
caatcgctggctggcctcgctgaacaatgtatgttcggcgttccaacctatgataaaccg
ttagtgacgggtgataccaatcagcttccagtgaatatccaggcggataaaaccgaagcc
aattatcccgacagcgcggtgttcaccggtaacgtgattgtagagcagggtaacagtacc
ctgaccgcgaaccaggttcagttacatcaaacccaggagtccggtcagccggtgcctgtg
cgaacggttaccgcaatcggtgatgtcaattatgatgacccacagattatcctgaaagga
cccaaagcctggtcgaatctgaataccaaagataccaatatggacaaaggtaactatcag
atggttggccgtcagggacgtggtgacgcggatttgatgaaacaacgtggtcaaaaccgc
tataccattttagaaaatggtacctttacttcatgcttgcctggcgataacagctggagc
gtagtgggcagtgaagtgatccacgatcgtgaagaagaagtggctgaaatttggaatgct
cgctttaaaatcggcccagttcctattttctatagcccgtatatgcaacttccggtgggt
aacaagcgtcgttcaggtttcctgattccgaatgcgcgttattcgacaaatactggttta
gagtttttcttgccgtattattggaatatcgcgcctaactttgacgccaccattacgccg
cattatatggaaaaacggggcacccaactccagaacgaattccgttacctgctggcacct
ggctccggtacgatggcactagactggctgccgagtgatcgggaatacaaaagtctggat
cccgtcaataatgataaagcccgctggttatactactggggtcattctggtgtaatggat
caggtatggcgctttaatatcgactacaccaaagtgagtgatccgcgctacttttctgac
ttcacctctttgtatggctccagtactgatggctatgccacgcagattttcagcgtaggc
tacgcacaggaaaactggaatgccaccttggcatccaaacaattccaggtatttaccgat
gcaggtaatgcgaatgcctaccgcgcccagccacagctagacttgaattattacaaaaac
gatattggtccgtttgatctgcatgtttatgggcaggttgctaaatttaccagcgttaac
ccgaataatccgaaagctgaccgttaccacatcgaacctgcgctcaacctaccgttggcc
aacggctgggccagtatcaataccgaagccaaactgctggcaacccattaccagcaagat
atccctaccggttttgccaacagttatgcgcctgaactaaaggactcagtgaatcgcgtg
ctgccgcagtttaaaatcgacggtaaaatggtatttgatcgtcaaatggattgggctgaa
aattatacccaaactttagagccacgggcgcaatacctgtacgtcccttatcgtaaccaa
gatgatatctacctttacgataccaccctgttgcaaacagactacagtgggctattccgc
gatcgtacttatagtggtctggatcgcattgcatccgccaaccagattgccaccggttta
acctcgcgtatttatgatgatgctctggttgaacgttttaacgtttctttaggtcaaatc
tattacttcagtcgttcccgtaccggtgatgagaataaaaaccagaccaatatcgataat
agtgatgatactggcagcttggtatgggccggcgacacttactggaaaattaccgataag
tggggctttagaggcggagcgcagtacgatacccgcttgggaagtctgactcagggtaat
acagtgatggaatatcgccacaatgccgaaacggtgcttcagttgaactaccgctacgcc
agccctgaatatattcaggcggcggtacctaaggtgagaagcaagggctatcaggaaggt
atttctcaagtgggtgcagtggccagtttaccgttggctgaccgttgggctatcgtcggg
tcatactattacgacactaaggccaatcaaccggctagccaactggttggggtacagtac
aatacctgttgctgggcggttaatctgggctatgaacgtaaaatcaacggctggaacacg
ctggacaataccagtaaatatgataacaaaatctcgtttaacgtcgagttacgtggtttg
agcagcgaccacagtctgggtacccaacaaatgctgcgctctggtattctgccttaccaa
agcgcattttga
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