Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_13020
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Entry
UGYR_13020 CDS
T03887
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yrb03021
]
UGYR_13020
Transcription machinery [BR:
yrb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
UGYR_13020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
Helicase_RecD
COG2_N
Na_Ca_ex_C
OapC
Motif
Other DBs
NCBI-ProteinID:
AKA39220
LinkDB
All DBs
Position
complement(2885660..2888566)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAIDVRMVTLLFPATGENRLYARNDSPITRVMFNPGDT
ISNHEGWQLKVEEVIHENGLITYIGTRLDTEETGVVMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRYRARKYQSEQFRLPWSGLRGVRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLIVVPESLQHQWLVEMLRRFNLRFSLFDDSRYSEAMQ
DSSNPFETEQLVICSLDFVRRNKQRLEQMADASWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAENIPGVLLLTATPEQLGQQSHFARLRLLDPDRFHDYEEFVSEQQQYRPIADAVTLLL
GGERLADDKLNMLGEMIAEQDIEPLLKAANSDGEDSEAARRQLVNMLMDRHGTSRVLFRN
TRNGVKGFPHRVLHEIKLPLPTQYQTAIKVSGIMSAKKSLEARARDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLNYLIANRDEKVLVICAQAATALQLEQVLREREAIRAAVFHEGLSL
IERDRAAAYFATEEDGAQVLLCSEIGSEGRNFQFACQLVMFDLPFNPDLLEQRIGRLDRI
GQNREIQIMVPYLENTAQAVLVRWYHEGLDAFEHTCPTGRTIYDSAYQELIGYLATPAEQ
EGLDEFIQNCRKQHDGLKLQLEQGRDRLLEMHSNGGEHGQELAEAIANQDNDINLVSFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFNRDQALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTP
VRMLMDRNGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQEVHTMLQQAEALVEEQAQ
ALIETATHEADEKLSAELSRLEALKAVNPNIRDDELETLEHNRKMVMENLSQAGWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaacttgggctgggt
actgtcgtagccatcgacgtacgtatggtcaccttactgttccctgcaaccggtgaaaac
cgcctttatgccaggaatgactcgccaatcacccgcgtgatgtttaaccccggtgacacc
atcagtaaccacgaaggttggcaactgaaagttgaggaagttatccacgaaaacggattg
attacctatatcggcacccgtttggataccgaggaaaccggcgtggtaatgcgcgaagtg
ttactggatagcaaactgaccttcagtaaacctcaagatcggctattcgccgggcaaatc
gatcgcatggatcgtttcgccctgcgctaccgcgctcgtaaataccaaagcgagcagttc
cgactgccgtggagtggcctacgtggcgtgcgcgccagcctgatcccacatcagttgcat
attgcctatgaagtgggtcaacgtcatgcaccacgcgtattattagccgatgaagtcggt
ctgggtaaaaccattgaagccgggatgattatccaccagcaattgttggctggtcgtgca
gaacgcgtgctgattgtggtaccggaaagcctgcaacatcaatggttggtcgagatgctg
cgccgcttcaacctacgcttctcgctgtttgatgacagccgctattctgaagcgatgcaa
gacagcagtaatcctttcgaaaccgaacaactggttatctgctcgctggattttgtccgc
cgtaataagcaacgtttggagcagatggccgatgcctcttgggatctgttggtggtggat
gaggctcaccatctggcttggagcgaagaagcaccgagccgtgaatatcaggttatcgag
caactggctgaaaatatccccggcgtattgctgctaacagcgacaccggagcaactgggt
caacagagccactttgcccgcttacgcctgctggatccggatcgtttccacgattacgaa
gagtttgtcagcgaacagcagcaatatcgtccgattgccgatgccgtcaccctgttgctg
ggcggtgaacgtctggctgatgacaaattgaatatgttgggcgaaatgattgccgaacag
gatatcgaaccgttgctgaaagcggctaatagcgacggtgaagacagcgaggctgcccgt
cgtcagttggttaacatgttgatggatcgccacggtaccagccgagtcctattccgtaac
acccggaacggcgtaaaaggcttcccgcaccgcgtactgcatgaaatcaagctgccgcta
cccacccagtatcaaacggccattaaagtctccggtattatgagcgcgaagaaatcgctg
gaagcccgtgccagagatatgctttacccagagcagatttatcaggaatttgaaggggaa
aatgcgacctggtggaactttgacccgcgagtcgaatggctgcttaactatttgatcgcc
aatcgcgatgaaaaagtgctggttatctgtgctcaagccgcaaccgctctgcaattggag
caggtattgcgcgagcgtgaagcgattcgtgccgccgtgttccatgaaggtttatcgctg
atcgaacgcgatcgcgcagcggcgtattttgccactgaagaagacggggcgcaggttctg
ctgtgttccgaaattggttccgaaggccgtaacttccagtttgcctgccagttggtgatg
tttgatctgccgtttaacccagacttgctggaacagcgtattggtcgtctggaccgtatc
ggtcagaaccgcgaaattcagatcatggtgccttacctggaaaataccgctcaggcagta
ttagtacgctggtatcacgaaggtctggatgcatttgagcacacatgcccgaccggcagg
actatctacgacagcgcctatcaggaattaattggctacctggcgacgcctgccgaacag
gaagggctggatgaatttatccaaaactgccgtaaacagcacgacggactgaaactacag
ttggaacaaggccgtgaccgcctgctggaaatgcactccaatggcggcgagcacgggcaa
gaactggccgaagccattgccaatcaggacaatgacatcaatctggtcagcttcgcactc
aacctgtttgatatcgtcggcatcaatcaagaagatcgcagcgataacctgatcgtactg
acgccgtcagatcatatgttggtaccggatttccctggcttaccgcaggatggctgcacc
gtgaccttcaaccgcgatcaagcgctgtctcgtgaagatgcgcagtttgtctcatgggaa
cacccgattattcgtaacggtttggatttgattctgtctggcgatactggaagctgtgct
gtttctctgttgaaaaacaaagcattaccagttggtacgctgttggctgaattggtttat
gtggtagaagcgcaagcaccgaaacatttacaattaacccgctttctaccaccgacaccg
gtgcgcatgctaatggaccgtaacggtaccaaccttgccgctcaggtcgagttcgagagt
ttcaatcgccaattgaacgcggtcaaccgtcatacctccagtaagctggtcaatgcggtg
cagcaagaagtacacaccatgttgcaacaggcggaagcactggtagaagaacaggcgcaa
gcgctaatcgaaacggccacacatgaagccgatgagaaactgagtgcggaactgtctcgt
ttggaagcattaaaagccgtcaacccaaatatccgcgatgatgagctggaaacgctggag
cataaccgcaagatggtcatggaaaacctgagtcaggctggatggcgtctcgatgcgatc
cgtttggtggtagtcactcaccaataa
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