Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_13050
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Entry
UGYR_13050 CDS
T03887
Name
(GenBank) transcriptional regulator SgrR
KO
K11925
SgrR family transcriptional regulator
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yrb03000
]
UGYR_13050
Transcription factors [BR:
yrb03000
]
Prokaryotic type
Helix-turn-helix
Other families
UGYR_13050
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GFIT
Motif
Pfam:
SgrR_N
SBP_bac_5
HTH_Crp_2
Sigma70_r4
HTH_29
HTH_11
HTH_NPRL3
HTH_IclR
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AKA39226
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Position
complement(2895794..2897455)
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AA seq
553 aa
AA seq
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MSTSRLQHQFIRLWQYYHGQPMDTTLQELADVLNCSRRHVRSLLGTMQQNGWLNWQAEVG
RGKRSRLTFLYTGLALQQQRAEELLEQDHIDQLVQLVGDKQAVRQMLLSQLGRSFRQGKH
ILRVLYYRQLQNLLPGSALRRSETHIVRQIFNGLTRINEENGEVEPDLSHHWKPLNPLHW
RFYLRPAIHFHHGRELETEDVISSLSRLTTQPLFSHIIQINSPTPYVIDVHLSTPDYWLP
WLLGSVQAMILPQEWESLPDFTRHPIGTGPYSVVHNRHNQFKIQAFDNYFGFRALIDEVN
VWVLPDLSEDLVSSGVHLQADDTGRDALESRLEEGCYFLLFDQRSSLICRPEVRRWLCEL
ITPVALLSHADALYQRYWSPAYGMLPRWHHNLLNPPGHKPAGLTELTLTCFSEHPEFDAI
NQTLRQVLAEQGVELIVQVLDYASWYQGEAKSDLWLGSANFYLPIEFSLMATLYELPLLQ
YCLSEELHQDVELWRNNDLPLAEWSQHLVNSHQFHPLFHHWLKLFGQHSMRGVRMNTLGW
FDFKSAWFTPPDG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttctcgcctgcaacaccaattcatccgtttatggcagtattaccacggccaa
ccgatggataccacgctgcaagagctggccgacgtgctaaattgctcacgccgtcacgtt
cgctctctattgggaacgatgcagcaaaacggatggttgaattggcaggctgaggtgggt
cgaggtaaacgctccagactcacctttctctacaccggtttggcactacaacaacaacga
gctgaagaactcctggaacaagaccatatcgatcagttggttcagttggtgggtgataag
caagcggtacgccagatgctactatctcaacttggacgcagctttcgacaaggaaaacat
atacttagagttctttactatcgccagttgcaaaatctactgcccggttcggcgctcagg
cgttcagaaacccatatcgtgcggcagatttttaacggactgactcgcataaatgaggaa
aatggggaagtcgagccagatttatctcatcactggaaacccctgaatccgctgcactgg
cgcttttatctgcgtccggcgattcatttccatcatggacgagagctggaaacggaggat
gtgattagctcgttaagccgcctaacgacccaacccctgttttcccatatcatccagatt
aactcccctacgccttatgtcattgatgtccacctgagtacgcccgactattggctacct
tggttactgggcagtgttcaagccatgattctgccacaggaatgggaaagtctgcctgat
tttacccgccatccgattggcaccggtccttattcggtcgtccacaaccgccacaatcaa
tttaaaattcaagcttttgataactattttggtttcagggcgttgattgatgaggtgaat
gtttgggtgttacccgatctgtcggaagatctggtttcttctggcgttcatttacaggca
gatgataccggtcgcgatgcactggaaagtcgactggaggaaggctgctatttcttgcta
ttcgaccagcgctcttccctgatttgccggccagaagtcagacgctggctgtgcgaactg
atcacgccggtggcattactcagccatgccgatgcgctttatcagcgttactggtcgccc
gcttatggcatgttaccacgttggcatcacaatcttctgaatccgccgggtcacaagcca
gccggactcactgagctgacgttaacctgctttagtgaacatccggaattcgatgccatc
aaccaaacgttacgtcaggttttggctgagcaaggggtcgaactgattgtgcaggtattg
gattacgccagttggtatcagggagaggcgaaaagtgacctctggctcggcagcgccaat
ttctatctgcccattgagttttctctaatggcaacgctttatgaattgccgctgctgcaa
tactgcctcagcgaagaactgcatcaggatgtcgaactatggcgtaataacgacttaccg
ctggccgagtggagtcagcacttggtcaatagccatcaatttcatccactattccatcac
tggctaaagttattcggccagcacagcatgcgcggcgtacgcatgaatacgctaggctgg
tttgatttcaagtcggcgtggtttacaccacctgatggataa
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