Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_13590
Help
Entry
UGYR_13590 CDS
T03887
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UGYR_13590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yrb03400
]
UGYR_13590
DNA repair and recombination proteins [BR:
yrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
UGYR_13590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
MutS_C
Motif
Other DBs
NCBI-ProteinID:
AKA39325
LinkDB
All DBs
Position
complement(3024527..3027082)
Genome browser
AA seq
851 aa
AA seq
DB search
MNNTEKLNAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGA
SAGEPIPMAGVPYHAIENYLAKLVQLGESAAICEQIGDPATSKGPVERKVVRIVTPGTVS
DEALLQERQDNLLAAIWQDARGFGYATLDISSGRFRVSEPSDTETMAAELQRTNPAELLY
PETFEQMPLIEQRHGLRRRPLWEFELDTARQQLNMQFGTRDLIGFGVEQAHQALRAAGCL
LQYVKDTQRTSLPHIRGLTMERQQDGIIMDAATRRNLELTQNLSGGSDNTLAAILDQCVT
PMGSRMLKRWLHMPIRDRDALAHRQQAIGGLQNITAELQQPLRQVGDLERILARLALRTA
RPRDLARMRHAFQQLPEIHQLLSQIAVPHIQYLLSQVGKFDELQNLLERAIVETPPVLVR
DGGVIASGYHAELDEWRSLADGATDYLDRLEIREREKLGLDTLKVGFNGVHGYFIQVSRG
QSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALAIEKALYEEIFDRLLPHLT
ALQSSAGALAELDVLANLAERAETLNYTCPTLSDNPGIKIVAGRHPVVEKVLRDPFIANP
LSLSPQRRMLIITGPNMGGKSTYMRQTALIVLLAHMGSFVPADNAVIGPVDRIFTRVGAA
DDLASGRSTFMVEMTETANILHNATEQSLVLMDEIGRGTSTYDGLSLAWACAENLASRIK
AMTLFATHYFELTTLPEKMEGVVNVHLDAMEHGETIAFMHSVQEGAASKSYGLAVAALAG
VPREVIKRARQKLKELESLSNNAASSNIDGSQLTLLNEEVSPAVEALEMLDPDSLSPRQA
LEWLYRLKGMV
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacagaaaagctcaacgcacacaccccgatgatgcagcagtacttgaaatta
aaagctcagcatcctgaaattctattgttttaccggatgggtgatttttacgagttgttt
tatgatgatgccaaacgtgcatctcagctgctggatatctcgctaaccaagcgcggagcc
tctgccggtgaacctattcctatggccggtgtaccttatcatgccattgaaaactatctg
gccaaattggttcaactgggtgagtccgcagccatctgtgagcaaataggcgatcccgcg
accagtaaaggccctgtagaacgtaaagtcgtacgcattgtcacacccggtaccgtcagc
gatgaagccttgctacaagagcgtcaggacaacctgctggcggctatatggcaagatgcc
cgtggattcggctatgccactttggatatcagctccggccgttttcgtgtctcggaaccc
tcggatacagagacaatggcggcagagctacagcgcaccaatccggcagagttgctctat
ccagaaacctttgaacaaatgccattgattgaacaacgacacggcttacgccgtcggcct
ctttgggaatttgaactggatacggctcgccagcagctcaatatgcaatttggtacccgc
gatcttatcggcttcggcgtagagcaggcacatcaagcgctacgcgctgcaggttgcttg
ttgcaatacgttaaagatactcagcgaacctctctgccacatattcgcgggttgacgatg
gagcggcaacaagatggcatcattatggatgcggcaacccgccgtaatctggagctgaca
caaaatttgtcgggtggtagtgataatacgctcgccgctattttagaccagtgcgtcaca
ccaatgggtagcagaatgcttaaacgctggttgcatatgcccattagagatagagatgcc
ttggcccaccgccagcaggcaataggcggcttacagaatatcaccgctgaattgcagcag
ccgctacgtcaggtgggtgacttggaacgtatattggctcgtttggccttacgaaccgca
cgtcctcgggatctggctcgtatgcgccacgcttttcagcaattacctgaaattcatcaa
ctattgagccaaattgctgttccacacatacaatatctattatcgcaagtgggtaagttt
gacgaattgcagaatctgctagagcgggcaattgtagaaacccctccggttttagtgcgc
gatggtggcgtcattgcttctggttatcatgcagaattagacgaatggcgcagtctggct
gatggtgcgactgactacctcgatcgtctggaaatccgcgaacgagaaaaactgggtctg
gatacgctgaaagttggctttaacggcgttcatggctattttattcaggtcagtcggggc
caaagccatttggtaccgatccactatgtccgacgacagacgctaaaaaatgccgaacgc
tatattattccggaattaaaagagtacgaagataaagttctcacctccaaaggaaaggca
ttagcgattgaaaaagcgctgtatgaagagatcttcgataggttactgccccaccttacg
gcacttcaatcaagcgcaggcgctctggcagaacttgatgtgcttgccaatttggcagaa
cgcgcagaaacactcaattatacctgcccaacgcttagtgataatccaggcatcaaaatc
gttgcaggccgccatcccgttgtagaaaaggtgctacgcgatccttttattgccaacccc
ctgtcactttcaccacaacgtcgaatgctgatcattactgggccaaatatgggaggtaaa
agtacctatatgcgtcaaacggcattaattgtgctgctggcgcatatggggagctttgta
ccagcagataatgcggttattggccctgttgatcgcatatttacccgcgtcggtgccgca
gatgatttggcatctggccgctcaacctttatggttgaaatgaccgaaacggccaatatt
ctgcacaacgcgaccgagcaaagcctggtactcatggatgaaatcggccgagggacgtct
acttatgatggtctgtctttagcttgggcctgcgccgaaaatctggcgagccgcatcaag
gcaatgacgctctttgctacccattacttcgagttaactacgctaccggagaaaatggaa
ggtgtcgtcaacgtacatctcgacgcaatggagcatggtgagactatagcctttatgcat
agcgtacaggagggcgccgccagtaaaagttatggtctggcggttgccgcactggctgga
gtccctcgtgaagtgattaagcgtgcgcgacaaaagctgaaggaattggagtcactctcc
aataacgcagccagcagtaatattgatggctcacagctgacgttactgaatgaggaagtg
tcaccggcagtcgaagcgctagaaatgctggatccggattcgctaagcccacgccaagca
ctggaatggctttatcgattgaaaggtatggtgtaa
DBGET
integrated database retrieval system
