Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_15145
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Entry
UGYR_15145 CDS
T03887
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00550
Peptidoglycan biosynthesis
yrb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
UGYR_15145
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yrb01002
]
UGYR_15145
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yrb01011
]
UGYR_15145
Enzymes [BR:
yrb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
UGYR_15145
Peptidases and inhibitors [BR:
yrb01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
UGYR_15145
Peptidoglycan biosynthesis and degradation proteins [BR:
yrb01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
UGYR_15145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AKA39580
UniProt:
A0A085U5P1
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All DBs
Position
complement(3366044..3367255)
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AA seq
403 aa
AA seq
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MKYVTTPRFIKSIALGTVIVISATSVANADDVNMKTMIPGVPQIDAEAYVLIDYNSGKVL
AEMNADARRNPASLTKMMTSYVIGQAIKSGKIGPEDMVTVGKDAWATGNPVFQGSSLMFL
KPGDQVPVSKLTRGINLQSGNDACVAMADYVAGSQDSFVNLMNNYVNALGLKNTHFKTVH
GLDAEGQYSSARDMALIGQALIRDVPDEYAIYKEKEFTFNNIRQMNRNGLLWDTSLNVDG
IKTGHTDAAGYNLVASATEGQMRLISAVLGGHTYKGRETESKKLLTWGFRFFETVAPLKV
GKEFASEPVWFGDTDRVQLGVDQDVYLTIPRGRMKDLKASYVLNTPEIHAPLAKNQVVGS
INFQLDGKTIDQRPLVVMNEVKEGGIFSRMVDYIKLMFHHWFG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgtaactacccctcgttttatcaagagcatagcgctcggcaccgttatcgtc
ataagcgcaacttccgttgccaacgccgatgacgtcaatatgaaaaccatgattcccggc
gtgccacaaatcgacgcggaagcttatgtactgattgactacaactccgggaaagtattg
gcagaaatgaatgccgatgcgcgccgcaaccctgccagtctgactaaaatgatgaccagt
tatgttattggtcaggcaatcaaatcaggcaaaatcggccccgaagatatggttaccgtc
ggtaaagatgcctgggcgactggcaacccagtgttccaaggctcatcattgatgttcctg
aaacctggcgatcaggttcccgtatccaagctaactcgtggtatcaatcttcaatcaggt
aatgacgcttgtgtcgctatggccgattatgttgctggcagccaagattccttcgtgaat
ctgatgaataactacgtcaacgcgctaggcctgaaaaatacccacttcaaaacggttcac
ggcctggatgctgaaggtcaatacagctccgcgcgcgatatggcgttgattggtcaggcg
ttgattcgtgatgttccagacgaatatgccatctacaaagaaaaagaatttaccttcaat
aacatccgtcagatgaaccgtaacggcttactgtgggataccagtctgaatgtcgacggc
atcaaaaccggtcatactgatgctgcgggttataacttggtggcatccgccactgaaggc
cagatgcgcctgatttcagccgtacttggtggtcatacttataaaggccgtgaaaccgaa
agcaaaaaactgctgacctggggcttccgtttctttgaaaccgtagcaccattgaaagta
ggcaaggaatttgcttctgaacccgtttggttcggcgataccgatcgcgtacagttaggc
gtagatcaagacgtttacctgacgattccacgtggccgaatgaaagaccttaaagccagc
tatgtgctgaataccccagaaattcatgcaccactggccaagaatcaggttgttggcagc
attaacttccaactggatggcaaaactatcgatcaacgcccactggtggtgatgaacgaa
gtgaaagaaggcggtatcttcagccgcatggtcgattatatcaaactgatgttccatcat
tggttcggttaa
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