Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_15245
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Entry
UGYR_15245 CDS
T03887
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yrb03016
]
UGYR_15245
Enzymes [BR:
yrb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
UGYR_15245
Transfer RNA biogenesis [BR:
yrb03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
UGYR_15245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
CodY
Amdase
Motif
Other DBs
NCBI-ProteinID:
AKA39599
UniProt:
A0A085U612
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Position
complement(3386628..3388052)
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AA seq
474 aa
AA seq
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MTKKLHIKTWGCQMNEYDSSKMADLLASTHGYELTDVPEEADLLLLNTCSIREKAQEKVF
ALLGRWKQLKATNPQLVIGVGGCVASQEGDHIRQRAPCVDVIFGPQTLHRLPEMLNHVLG
THSPIVDISFPEIEKFDRLPEPRADGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPVDD
VLFEIAQLAAQGVREVNLLGQNVNAYRGATYDGDICRFAELLRLVAAIDGIDRIRFTTSH
PIEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRAHTALEYKSIIRKLRKARPNI
HISSDFIVGFPGESQADFEQTMTLVAEVNFDMSYSFIYSSRPGTPAADLPDDVSDDEKKQ
RLHALQERITQQAMNYSRAMVGTVQRVLVEGTSRKDVMELAGRTENNRIVNFVGTPEMIG
TFVDVNIVDVYTNSLRGVVVRTEKQMDLRTVESPASVIARTRKENDIGVAQYQP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaactccatatcaaaacctggggctgccaaatgaacgaatacgattcgtcc
aaaatggcggacctgctggccagcacccacggttatgagctaactgacgtgcctgaagaa
gccgatctgttattgctgaacacctgctcaattcgcgaaaaagcgcaggaaaaagtcttc
gccctgctaggccgttggaagcagttgaaagccactaatccgcagttagtgatcggcgtt
ggcggctgtgtcgcctctcaagaaggcgatcacattcgccaacgcgcgccttgcgtcgac
gttattttcgggccgcaaaccttgcaccgcctaccggaaatgctcaaccacgttctggga
acccacagcccgatcgtggatatcagtttcccggaaatagaaaaatttgaccgtttaccc
gaaccacgcgccgatggccccacagcctttgtctccatcatggagggctgcaataaatat
tgcacattctgcgtagtaccttatacgcgcggcgaagaagtcagtcgcccggtcgatgat
gtgctgtttgaaattgcccaattagccgctcagggcgtacgcgaagtgaatctgctcggg
caaaatgttaacgcttatcgaggtgcaacctatgacggcgatatttgtcgttttgccgag
ttattacgcttggtcgcagctattgacggtattgaccgcattcgcttcaccaccagccat
cctatcgagtttaccgatgatattatcgcggtatatgaagatacgcccgagctggtcagt
ttcctgcatttgcccgtgcagagcggctcagaccggattctaaccatgatgaaacgcgcc
cataccgcattagaatataaatccatcattcggaaattgcgcaaagctcgccccaatatt
catatcagctcagactttattgtcggctttccaggtgaaagtcaggccgattttgagcaa
accatgacgctggttgccgaggtgaatttcgatatgagctacagctttatctattcctcc
cgccctggaacgccagcggcagacttgccggatgacgtttccgatgacgagaaaaaacag
cgactgcatgcgctacaagaacgcatcacgcagcaggcaatgaactatagccgggcaatg
gtcggcaccgtccagcgtgtattggtcgaagggacttcacgtaaagacgtaatggaactg
gcgggtcgtaccgaaaataatcgtattgtgaattttgtcggcacgcctgagatgattggg
acatttgtcgatgtaaacattgtggacgtttacaccaactcgttacgcggcgtggtcgtt
cgcaccgaaaaacagatggatttacgcacagtagaatcaccggcctccgtgattgcccgc
acccgcaaagagaatgatattggcgttgcgcaataccagccttaa
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