Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_16205
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Entry
UGYR_16205 CDS
T03887
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00260
Glycine, serine and threonine metabolism
yrb00270
Cysteine and methionine metabolism
yrb00450
Selenocompound metabolism
yrb00670
One carbon pool by folate
yrb01100
Metabolic pathways
yrb01110
Biosynthesis of secondary metabolites
yrb01230
Biosynthesis of amino acids
Module
yrb_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
UGYR_16205
00270 Cysteine and methionine metabolism
UGYR_16205
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
UGYR_16205
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
UGYR_16205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yrb04147
]
UGYR_16205
Enzymes [BR:
yrb01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
UGYR_16205
Exosome [BR:
yrb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
UGYR_16205
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Ortholog
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AKA39777
LinkDB
All DBs
Position
complement(3597675..3598820)
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AA seq
381 aa
AA seq
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MAKFDTLTVHAGYTPDSTGAVMPAIYATSTFAQPAPGEHTGYEYSRSGNPTRSALEKAIA
ELENGSRGYAFASGLAACSTVLELLDQGSHIVAVDDLYGGTYRLLEKVRNRTAGLRVTYV
SPADTDGLEQAIQPDTKMIWVETPTNPLLKLADLAAIAGIAKKYQLISVADNTFASPYIQ
RPLDLGFDIVLHSATKYLNGHSDVVAGVAAVGNNPELAEQLGFLHNAVGGILDPFSSFLT
LRGLRTLALRMARHNESALRIAHWLEQQPQVEAVYYPGLESHPQHQLARKQMSGFGGMIA
VRLKGEPEYARQVIKGSHLFTLAESLGGVESLISQPYSMTHASIPLEIRLKHGITPQLLR
LSIGIEDTEDLIADLAQALAS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtttgacactctgactgtacatgcaggttataccccagatagcaccggtgcc
gtcatgccggcaatttatgccacctctactttcgcccagcccgcaccgggcgaacacacc
ggctacgaatattcccgcagtggtaaccccacccgcagcgcgttagagaaggcgattgcc
gagctggaaaacggcagtcgtggctatgcttttgcctccggtctggccgcctgttcgaca
gtactggaattattggatcaaggtagccatattgtggccgttgacgacctgtatggcggc
acctatcgcctgctggaaaaagtgcgcaatcgcaccgctggcctgcgcgttacctatgtt
tcaccggcagatactgacggactggaacaagctattcagccggataccaaaatgatttgg
gtggaaacgccgaccaatccgttgctgaaattggccgatttagcggccatcgccgggatt
gccaagaaatatcaattaatcagtgtggcggataacacctttgcctcgccttatatccaa
cgcccactggatttaggtttcgatattgtgttgcattcggcgactaaatacctcaacggc
cattcagatgtggtggctggggtcgctgcggtaggaaataatccagaattggcagagcaa
ttaggatttttacacaacgcggttggcgggattctcgatccgttcagcagcttcctgact
ctccgtggcctacgtacactggcactgcgaatggctcgtcataatgaaagcgctctgcgg
attgcccattggctggaacagcagccgcaggtagaagcggtgtattatccggggcttgaa
agccacccgcaacatcagttggctcgcaaacaaatgtctggttttggcggcatgattgca
gtacgcctgaaaggtgaaccggagtatgcccgtcaggtcatcaagggttcccatctgttt
actttagcggaaagtttggggggcgtagaaagcctgatcagccaaccttacagcatgact
catgcttctatccccttggagatccgccttaaacacggcatcacgccgcagttattacgt
ctttctatcggaattgaagacactgaagatctgatcgccgatctggcacaggcattggcc
agttaa
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