Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_16500
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Entry
UGYR_16500 CDS
T03887
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yrb03032
]
UGYR_16500 (ihfB)
03036 Chromosome and associated proteins [BR:
yrb03036
]
UGYR_16500 (ihfB)
03400 DNA repair and recombination proteins [BR:
yrb03400
]
UGYR_16500 (ihfB)
DNA replication proteins [BR:
yrb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
UGYR_16500 (ihfB)
Chromosome and associated proteins [BR:
yrb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
UGYR_16500 (ihfB)
DNA repair and recombination proteins [BR:
yrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
UGYR_16500 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HAAS
Motif
Other DBs
NCBI-ProteinID:
AKA39832
UniProt:
A0A085U9V8
LinkDB
All DBs
Position
3672084..3672368
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AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQQSHIPAKAVEDAVKEMLEHMAGTLAEGERIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaacttattgaaagacttgctggccagcaatctcatataccggctaag
gccgttgaggatgcagtgaaagaaatgcttgagcatatggctggaacattagctgaaggt
gagcgcattgagatccgcggatttggcagtttttcgcttcactaccgtgctccgcgtgtt
ggccgtaatccgaagactggtgataaagtagagttggaaggtaaatacgttccacacttt
aagccaggtaaagaattacgcgatcgcgctaatatctacggctaa
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