Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_16510
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Entry
UGYR_16510 CDS
T03887
Name
(GenBank) lipid transporter ATP-binding/permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
UGYR_16510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yrb02000
]
UGYR_16510
Enzymes [BR:
yrb01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
UGYR_16510
Transporters [BR:
yrb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
UGYR_16510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
RsgA_GTPase
AAA_22
ABC_membrane_2
AAA_16
MMR_HSR1
APS_kinase
AAA_29
DUF87
AAA_18
nSTAND3
DUF5906
SLFN-g3_helicase
HUTI_composite_bact
AAA_15
Cytidylate_kin
6PF2K
AAA_24
AAA_30
AAA_25
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
AKA39834
LinkDB
All DBs
Position
3675035..3676783
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AA seq
582 aa
AA seq
DB search
MMNDKDLSTWQTFRRLWPMIAPFKTGLIAAAIALILNAASDTFMLSLLKPLLDDGFGKAN
SSILMWMPLAIIGLMLVRGVSGFISSYCISWVSGKVVMHMRRRLFSHMMGMPVSFFDQQS
TGTLLSRITYDSEQVASSSSSALITVVREGASIIGLFILMFYYSWQLSLILIVIAPIVSI
AIRMVSKRFRNISKNMQSTMGEVTTSAEQMLKGHKEVLIFGGQQVETERFNTVSNRMRQQ
GMKMVSASSISDPIIQLIASFALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFAILDMEQEKDDGKLEIDRVKGDIDFRNVTFKYPGKETPALI
DINIEIKAGKTVALVGRSGSGKSTIANLLTRFYDVSAGSILMDGHDLREYTLSSLRNQVA
LVSQNVHLFNDTVANNIAYARDHQYTRAEIEKAARMAYAMDFIEKMDNGLDTVIGENGVM
LSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLS
TIEKADEILVIEDGRIIERGEHAELLARQGAYAQLNRMQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgataaagatctctccacctggcagactttccgtcgcctctggccgatgatc
gctccttttaaaaccggtcttatcgctgcggcaatagcgctaatcctcaatgcggccagc
gatacctttatgctgtcgttgctgaaaccgttactggatgacggttttggcaaggcgaac
agttctattctgatgtggatgccgttagcgatcattgggttgatgctggtccgtggggtc
agtggttttatctccagctactgtatttcatgggtatcaggaaaagtggtgatgcacatg
cgccgccgtctgttcagccatatgatgggcatgcctgtttcattttttgatcaacaatct
acaggtacgttgttatcacgtattacctatgattctgagcaggttgcctcatcttcttcc
agcgcgttaattaccgtggttagggaaggtgcttcaattatcggcctgtttattctgatg
ttttattacagctggcaattatcgctaatattaattgttatcgcgcctatcgtctctatc
gctatccgcatggtatccaagcgttttcgtaatatcagtaagaatatgcaaagtactatg
ggcgaagtgacaaccagtgctgaacagatgctgaaagggcacaaagaagtgcttattttt
ggtggacagcaggttgaaaccgagcgttttaatacggtcagtaaccgtatgcgccaacag
ggcatgaagatggtctctgcctcgtcgatttcagatccgatcattcagctcatcgcttct
tttgctttggcgtttgtactgtatgccgccagtttccccagcgtaatggaaactctgacg
gcgggtacaattacggttgtcttctcatccatgattgccctgatgcggccacttaaatca
ctgacaaatgtgaatgcccaattccagcgtggtatggctgcatgccagactttattcgct
attctggatatggaacaagaaaaagacgatggtaaactggaaattgaccgcgtcaaaggt
gacattgatttccgtaacgttacatttaagtatccaggtaaagaaacgccagcactgatt
gatatcaacatagagattaaagccggtaaaacggtagcactggtcggacgctcaggttct
ggcaagtccaccattgccaatttactgacccgtttctacgatgttagtgctggcagcatc
ctgatggatggtcatgacttgcgtgaatataccttgagttctttgcgtaatcaggtcgca
ttggtttcgcagaatgttcatttgttcaacgatacggtcgctaataacatcgcctacgca
cgtgatcatcaatacactcgcgccgaaatagagaaagctgctcgtatggcttatgccatg
gactttatcgaaaaaatggataacggtctggatacggtgattggcgagaatggggtgatg
ctttccggtggtcagcgtcaacgcattgctattgcccgtgctttattgcgcgattgtccc
attctgattttggatgaagccacttctgcgttggataccgagtctgagcgggcgattcag
tcggcgctggatgaattgcagaaaaaccgtacttcactggttattgctcaccgcttatcg
actattgaaaaagcggatgaaattctggtgatcgaagatggccggattattgaacgtggt
gaacatgcggaactcctggctcgccaaggtgcctacgctcaacttaaccgtatgcagttt
ggccaatga
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