Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_16540
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Entry
UGYR_16540 CDS
T03887
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00541
Biosynthesis of various nucleotide sugars
yrb01100
Metabolic pathways
yrb01250
Biosynthesis of nucleotide sugars
Module
yrb_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
UGYR_16540
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yrb01005
]
UGYR_16540
Enzymes [BR:
yrb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
UGYR_16540
Lipopolysaccharide biosynthesis proteins [BR:
yrb01005
]
Lipid A
UGYR_16540
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
DacZ_P
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
AKA39840
UniProt:
A0A085U9W6
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All DBs
Position
3680894..3681652
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AA seq
252 aa
AA seq
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MSFIAIIPARYASTRLPGKPLADIGGKPMVVHVMERALESGASRVIVATDHEDVMRAVEA
AGGEVCLTRVDHQSGTERLAEVIEHYGFADDDIIVNVQGDEPLIPPVIIRQVANNLAASR
AGMATLAVPIESSEEAFNPNAVKVVMDAQGYALYFSRAAIPWERERFAQSKDSIGDCFLR
HIGIYAYRAGFIRRYVNWAPSKLEQIELLEQLRVLWYGEKIHVAVAEAAPTVGVDTLEDL
QRVREILLKKCN
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagttttatcgcgattattcctgcacgctatgcgtcaacccgtttaccgggtaaacct
ctggccgatattggtggtaaaccgatggtggttcacgtgatggaacgggctttagagtct
ggagccagccgggttatcgttgcaacggaccatgaagatgtgatgcgggcggtagaggct
gcgggtggcgaagtgtgtctgacgcgagtggatcaccaatctggtaccgaacgtttggct
gaggtgattgagcattacggttttgctgatgacgacattattgtcaatgtgcaaggcgat
gagcccctgatcccaccggttattatccgtcaggtcgcgaataatttggctgcatcccgc
gcgggtatggccacgcttgcggtaccgattgaaagcagcgaagaggcatttaacccgaat
gcggtcaaagttgtgatggatgctcagggttacgcgctctatttctcccgcgcagctatt
ccctgggagcgtgagcgttttgctcaatctaaagacagtatcggtgactgttttctccgc
cacataggtatttatgcatatcgagctggttttattcgtcgctatgttaattgggcacca
agtaaattggagcaaatagaattactcgagcaattgcgagttctgtggtacggcgaaaaa
attcatgttgctgttgccgaagcggctccaactgtaggtgttgatacgctagaagacctg
caaagagttcgggaaatcctgctcaaaaaatgtaattaa
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