Yokenella regensburgei: HEC60_00455
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Entry
HEC60_00455 CDS
T06519
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
yre
Yokenella regensburgei
Pathway
yre03030
DNA replication
yre03430
Mismatch repair
yre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEC60_00455 (holA)
03430 Mismatch repair
HEC60_00455 (holA)
03440 Homologous recombination
HEC60_00455 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yre03032
]
HEC60_00455 (holA)
03400 DNA repair and recombination proteins [BR:
yre03400
]
HEC60_00455 (holA)
Enzymes [BR:
yre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEC60_00455 (holA)
DNA replication proteins [BR:
yre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEC60_00455 (holA)
DNA repair and recombination proteins [BR:
yre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEC60_00455 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QIU87946
LinkDB
All DBs
Position
complement(91989..93020)
Genome browser
AA seq
343 aa
AA seq
DB search
MIRLYPEQLRAQLSEGLRAAYLLLGNDPLLLQESQDAVRQVAATQGFDEHHTVTIDTSTD
WNALFSLCQAMSLFASRQTILLLLPENGPNAAINEQLATLVSLLHDDLLLICRGNKFTKA
QENAAWVTSLANRAVQVSCQTPEQAQLPRWLGSRAKQMNLQLDDAASQLLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLAGKSKRALHILQQLRLEG
SEPVILLRTVQRELLLLVTLKRHSAQTPLRTLLDKHRVWQNRRPLVTDAVNRMSTEQLRQ
AVTLLSRTELTLKQGYGQSVWSELESLSLLLCHKALADVFING
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattcggctctaccctgaacaactccgcgcgcagctctccgaagggctgcgcgcggcg
tatctattacttggtaacgatcctctacttcttcaggaaagccaggatgcggtccgtcag
gtggcggctacacagggctttgacgagcaccacaccgtcacgattgataccagcaccgac
tggaacgcgttattttctctgtgccaggcgatgagccttttcgccagtcggcaaaccata
ctgttactgctgccggagaacggcccaaacgcggcgattaacgaacaactggccaccctt
gtcagcctgctgcatgacgatttgctgctgatttgtcggggtaacaaattcaccaaagcg
caggaaaatgccgcatgggtaacctcgctggctaaccgcgcggttcaggtgagctgtcag
acgccggaacaggcgcagctgccacgctggctgggttcccgtgcaaaacagatgaacctt
cagcttgacgacgccgcaagccagcttttgtgttactgctacgagggcaacctgctggcg
cttgcccaggcgctggagcggctgtcactactctggccggacggcaaactgactctgccg
cgcgttgagcaggcggtaaacgatgccgcccactttacccccttccactgggttgatgcc
ctgctggccggtaagagtaagcgcgcgttgcatatcctgcagcaactgcgtcttgaaggg
agtgagccggtgattctgctgcgcaccgtgcaacgagaactgttgctgctggtcacgctg
aaacgccattctgcccagaccccactgcgcacattgctcgataaacaccgggtctggcag
aaccgtcgtccactggtgaccgatgcggtcaaccgtatgagcaccgaacaactacgccag
gccgttaccctgctcagccgcacagagctgacgctgaagcagggctacggacagtcggtg
tggtctgaactggaaagcctttctctgctactctgtcataaggcactggcagacgttttt
attaatggctga
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