Yokenella regensburgei: HEC60_00515
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Entry
HEC60_00515 CDS
T06519
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
yre
Yokenella regensburgei
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yre03016
]
HEC60_00515 (miaB)
Enzymes [BR:
yre01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HEC60_00515 (miaB)
Transfer RNA biogenesis [BR:
yre03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HEC60_00515 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QIU87958
LinkDB
All DBs
Position
complement(104869..106293)
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AA seq
474 aa
AA seq
DB search
MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTEVAEEADVLLLNTCSIREKAQEKVF
HQLGRWKLLKEKNPEIIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINAVRG
TRSPVVDISFPEIEKFDRLPEPRADGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDD
ILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGSIGTFAELLRLVAAIDGIDRIRFTTSH
PIEFTDDIIDVYRDTPELVSFLHLPVQSGSDRVLNLMSRTHTALEYKATIRKLREARPDI
QISSDFIVGFPGETTQDFEQTMKLIAEINFDVSFSFVFSARPGTPAADMVDDVPEEEKKQ
RLYILQDRINQQAMAWSRRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPEMIG
KFVDVEIVDVYTNSLRGKLVRTEDEMGLRVVETPESVIARTRKENDLGVGTYQP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaactccacataaaaacctggggctgtcagatgaacgaatacgattcatca
aagatggccgatctgctggatgccacccacgggtaccaactcaccgaagtggcggaagaa
gcggatgtgctgctgcttaacacctgctccattcgtgagaaggctcaggagaaagtcttc
catcagttgggtcgctggaagctcctcaaagagaagaatccggagatcattattggcgtt
ggcggctgcgtggcttctcaggaaggcgagcatattcggcaacgcgcccattacgtcgat
atcatctttgggccgcaaaccctgcaccgtttgccggagatgattaacgccgtgcgcggc
acccgcagcccggtcgtcgacattagcttcccggaaatcgaaaaattcgatcgtctgccg
gaaccgcgcgccgatggcccgaccgcattcgtatcaatcatggaaggctgcaacaaatat
tgcacctactgcgtggtcccctacacccgtggtgaagaggtgagccgtccaagtgacgac
atcctgtttgaaatcgctcaactggcggcacagggcgtgcgcgaagttaacctgcttggc
cagaacgtcaacgcctggcgtggcgaaaactacgacggtagcatcggcaccttcgctgaa
ctgctgcgcctggtcgcggctatcgacggcatcgaccgtatccgcttcaccaccagccac
ccgatcgagtttaccgacgacattatcgatgtctatcgtgataccccggagctggtgagc
ttcctgcatctaccggtgcaaagtggttccgaccgcgtattgaacctgatgagccgtacg
cacaccgcactggagtacaaggccactatccgtaagcttcgcgaagcgcgcccggatatt
cagattagctctgacttcatcgtcggcttcccgggagaaaccacccaggacttcgagcag
accatgaagctgattgccgagatcaacttcgacgtgagctttagctttgtcttctctgcc
cgtccagggacgccggctgccgatatggtggacgatgtgccggaagaagagaaaaagcag
cgtctgtatattctgcaggatcgcatcaaccagcaggcgatggcgtggagccgtcgtatg
ctcggcaccacccagcgtattctggtggaaggcacctcgcgtaagagcatcatggagctt
tcaggacgcaccgagaacaaccgcgtggtgaactttgaaggcactccggagatgatcggc
aagtttgtggacgtagagattgtcgacgtttacaccaactccttgcgcggcaagctggtg
cgtaccgaggatgaaatgggtctgcgcgttgtggaaacgccggagtcggttattgcccgc
acccgtaaagagaacgacctgggcgtgggaacctatcagccctga
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