Yokenella regensburgei: HEC60_01735
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Entry
HEC60_01735 CDS
T06519
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
yre
Yokenella regensburgei
Pathway
yre00541
Biosynthesis of various nucleotide sugars
yre01100
Metabolic pathways
yre01250
Biosynthesis of nucleotide sugars
Module
yre_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HEC60_01735 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yre01005
]
HEC60_01735 (kdsB)
Enzymes [BR:
yre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HEC60_01735 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
yre01005
]
Lipid A
HEC60_01735 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
QIU88179
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Position
367645..368391
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AA seq
248 aa
AA seq
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MSFVVIIPARYASTRLPGKPLQDINGKPMIVHTLERARESGAERVIVATDHPDVARAVEA
VGGEVCMTRVDHQSGTERLAEVVEKCGFSDDTIIVNVQGDEPTIPAANIRQVAENLARSQ
CGMATLAVPVHSAEEAFNPNAVKVVMDNAGYALYFSRATIPWDRDRFAQSRDTIGDSLLR
HIGIYAYRAGFINRYISWPPSPLEQIEMLEQLRVLWYGEKIHVEVAKMTPGTGVDTPEDL
ERVRLELR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtcgtcattattcctgcccgctacgcttctactcgcctccccggtaagcct
ttgcaggacatcaacggaaagccgatgattgtccatacgctggagcgtgcgcgtgaatca
ggtgccgaacgggtgattgtcgcgaccgatcatccggacgtggcgcgcgctgtggaggcg
gttggcggcgaagtctgcatgacccgcgtcgaccatcagtcgggcacagagcgtctggcg
gaagtggtggagaagtgtggtttcagcgatgacaccatcatcgttaacgtccagggcgac
gagccgacgatcccggcggccaatatccgccaggtcgcggaaaacctggcccgcagccag
tgcggcatggcaacgcttgccgtaccggtccacagcgcggaagaagccttcaacccgaac
gccgtaaaagtggtgatggataacgcgggctacgcgctttatttctcacgcgccactatt
ccgtgggatcgcgaccgtttcgcacaaagccgcgacacgattggcgattcgctgctgcgc
catatcggtatttatgcctatcgcgccggtttcattaaccgttacatcagctggccgccg
agcccgctggagcagattgaaatgctcgaacagctccgcgtgctgtggtacggcgaaaaa
atccacgttgaggtggcaaaaatgacaccgggtaccggtgtggacacgccagaagatctt
gaacgcgtccgacttgagttgcgttaa
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