KEGG   Yokenella regensburgei: HEC60_01945
Entry
HEC60_01945       CDS       T06519                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
yre  Yokenella regensburgei
Brite
KEGG Orthology (KO) [BR:yre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yre03400]
    HEC60_01945 (helD)
Enzymes [BR:yre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HEC60_01945 (helD)
DNA repair and recombination proteins [BR:yre03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HEC60_01945 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 Viral_helicase1 DEAD
Other DBs
NCBI-ProteinID: QIU88220
LinkDB
Position
419302..421356
AA seq 684 aa
MELKATTLGKRMAQHPYDRVEILNAGVKVSGDRHEFLIPFNQLLSIQCKRGLVWGELEFV
LPENKVVRLHGTEWAETQRFHHHLNSLWEQWGEEMSGIAAGVLEQQLAEISRFSAEGKWL
TRQALQGIREKILLALQALPIPVGRLNDFDNCRELWQQCQGWLKDIERSRLKHNQAFTDA
MLTQYSAFFANIESSPLNPAQARAVVNGEQSVLVLAGAGSGKTSVLVARAGWLLTRGEAA
ADQILLLAFGRQAAQEMDDRIRERLNTDAISARTFHSLALHIIQQGSKKVPAISKLENDS
KARQALLVKTWQQQCGEKKAQANGWRLWLEEEMGWNLPEGQYWQDEKLARRMGGRLDRWV
SLMRMHGGSQAEMIEGAPEEVKTLFGKRVKLMAPLLKAWKTALKTENAVDFSGLIHQAIS
VLEKGRFVSPWKHILVDEFQDISPQRAALLAALRKQNSRTTLFAVGDDWQAIYRFSGAQL
SLTTAFNHYFGEGDSCALDTTYRFNGRIGEIANRFVQQNPHQLAKPLNSLSAGDKKAVTL
MADDQLDALLDKLSGYATPDERILVLARYHHLKPASLEKAATRWPKLQLDFMTIHASKGQ
QADYVIIVGLKEGQDAFPAPARESVMEQALLPQPEDFPDAEERRLLYVALTRARQRVWLL
YNKEEPSSFVEILKDLSVPVVRKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaactaaaagcaacaacactgggcaagcgcatggcgcagcacccttacgatcgggtc
gaaatcctcaatgctggggtgaaagtctctggcgatcgccacgaatttctcattcctttt
aatcaattgctgtcgattcagtgcaaacgcgggctggtgtggggcgagctggagttcgtc
ctgccggaaaataaagtcgtccgcctgcacggcaccgaatgggcagaaacccaacgcttc
catcatcatcttaattctctctgggaacagtggggagaagagatgagtggcattgcggcc
ggcgtactggagcagcaattagcggagatttctcgctttagcgccgaaggtaaatggctt
actcgccaggcgttgcaggggatccgcgaaaaaattttgctggccctgcaggcgctgccg
atcccggttggcaggctgaatgacttcgacaactgccgcgagctgtggcagcagtgtcag
ggatggcttaaagatattgaacgcagccgcctgaagcataaccaggcctttactgatgca
atgctgacgcaatactcggcgttttttgccaacattgaatcttcaccgctgaatccggcg
caggcgcgggcggtggtaaacggcgagcagtcggtgctggtactggcgggggcgggtagc
ggtaaaacatcggtgctggtcgctcgcgctggttggctactgacacggggggaagctgcc
gccgatcaaatcctcctgctggcgtttggccgccaggcagcgcaagagatggacgatcgc
attcgcgagcgcctgaataccgatgccatcagcgccagaacgttccattcgctggcgctg
cacattattcagcagggtagcaaaaaagtccctgctatcagtaagcttgaaaacgacagt
aaagcccgccaggcgctgctggtcaaaacctggcagcagcagtgcggtgagaaaaaagct
caggctaacggctggcgcctgtggcttgaggaagagatgggctggaacctgcctgaaggc
cagtactggcaggatgagaagctggctcggcgcatgggggggcggctcgatcgttgggtg
agcctgatgcgtatgcacggtggctcgcaggcggaaatgattgagggcgcacctgaagag
gtgaaaacgctgttcggtaaacgcgttaagctcatggcaccactattgaaagcatggaaa
acggcgctgaaaacagaaaacgccgtcgatttctccggcctaattcatcaggcgataagc
gtgctggagaaagggcgctttgtcagcccgtggaagcacatcctggtggatgagttccag
gatatttcaccgcagcgtgcggcactgctggcggcactgcgtaagcagaactcgcgcacc
acgctgtttgccgtgggtgatgactggcaggctatttaccgtttcagcggggctcagctc
tcgctgacgaccgccttcaaccattactttggtgaaggcgatagctgcgcgctggatacc
acctaccgcttcaacgggcggattggcgaaatcgctaaccgctttgtgcagcagaacccg
caccagctggcgaagccgttgaacagcctgagcgccggggataaaaaggccgtcacgcta
atggcggacgaccagctcgacgcgctgcttgataagctcagcggctatgccaccccggat
gagcgaattctggtgctggcacgctatcaccacctgaagcctgcaagtcttgaaaaagcg
gccacccgctggccgaagctgcagttagatttcatgactattcacgccagtaaagggcag
caggcggattacgtgattattgttgggctgaaagaggggcaggatgcgttcccggcaccg
gcgcgtgaatcggtgatggagcaggcgctattgccgcaaccggaggacttcccggatgcc
gaagagcgtcgtctgctgtatgtcgcattaacccgcgcccgtcagcgagtctggctgctt
tacaacaaagaggagccatcttcgttcgtggagattttaaaagatctttcagtaccggtg
gtacgtaaaccctag

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