Yokenella regensburgei: HEC60_04425
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Entry
HEC60_04425 CDS
T06519
Symbol
ldcA
Name
(GenBank) muramoyltetrapeptide carboxypeptidase
KO
K01297
muramoyltetrapeptide carboxypeptidase [EC:
3.4.17.13
]
Organism
yre
Yokenella regensburgei
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yre01002
]
HEC60_04425 (ldcA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yre01011
]
HEC60_04425 (ldcA)
Enzymes [BR:
yre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.13 muramoyltetrapeptide carboxypeptidase
HEC60_04425 (ldcA)
Peptidases and inhibitors [BR:
yre01002
]
Serine peptidases
Family S66
HEC60_04425 (ldcA)
Peptidoglycan biosynthesis and degradation proteins [BR:
yre01011
]
Precursor biosynthesis
Carboxypeptidase
HEC60_04425 (ldcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S66C
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
QIU88645
LinkDB
All DBs
Position
complement(910674..911603)
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AA seq
309 aa
AA seq
DB search
MSLFHLVAPSGYCINQAAAALGVRRLEKNGHRVEHQQVITRRDRRFAGSEAERLSDINGL
AQLTGKDRIVLAVRGGYGASRLLESIDWPALVARQQQDPLLICGHSDFTAIQLGLLAQGN
VITFSGPMLAANFGAEPLNEFTQHHFWLALQNRTFTIEWQGHGPHCRAEGTLWGGNLAMF
NSLIGTPWMPKIRNGILVLEDINEHPFRVERMLLQLLHAGILSRQRAIVLGSFSGATPND
YDAGYTLDTMVDYLRSRLAVPVITGLDFGHEARTVTLPLGAKALLVNSGDATTLTLSGHP
VLSEEKMHS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtttcacctggttgccccctccggatattgtattaatcaggctgccgctgcg
ctaggcgtcaggcgtcttgaaaaaaacgggcatcgcgtggaacaccagcaggtcatcacc
cgccgcgatcggcgcttcgccggcagcgaagccgaacggttgagcgatatcaacggtctg
gctcaactcaccggtaaagaccgcatcgtgctggccgtgcgcggcggctacggtgccagc
cgcctgctggaatcgattgactggcctgcgctggtggcccgtcagcaacaggatccgctg
ctcatctgcggccacagcgattttaccgcgatccaactcgggctactggcgcagggcaac
gttatcaccttcagcggcccgatgctggcggccaacttcggcgccgaaccgctgaatgag
ttcacccagcatcacttctggctggcgctgcaaaaccgcaccttcactattgaatggcag
ggccacggcccacactgccgcgcggaggggacgctgtggggggggaatctggccatgttc
aactcgcttatcggcacgccgtggatgccgaagatccgcaacggcattctggtgctggaa
gatattaatgagcatccgttccgcgttgaacgcatgctgctgcagctgctgcatgccggc
attctttctcgccagcgcgcaatcgtgctcgggagcttcagcggtgcaacaccaaacgac
tatgatgccgggtataccctggacacaatggttgactacctgcgatcgcggctcgccgtt
ccggtgataaccgggctcgatttcggtcacgaagcgcgcactgtgaccttaccgttaggg
gcaaaggcactgctggtgaacagcggcgatgccaccacgctcaccctcagcggtcatccg
gtgctcagcgaagaaaaaatgcattcatag
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