Yokenella regensburgei: HEC60_04575
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Entry
HEC60_04575 CDS
T06519
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
yre
Yokenella regensburgei
Pathway
yre00061
Fatty acid biosynthesis
yre00071
Fatty acid degradation
yre01100
Metabolic pathways
yre01212
Fatty acid metabolism
yre02024
Quorum sensing
yre04146
Peroxisome
Module
yre_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HEC60_04575 (fadD)
00071 Fatty acid degradation
HEC60_04575 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HEC60_04575 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HEC60_04575 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
yre01004
]
HEC60_04575 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yre04147
]
HEC60_04575 (fadD)
Enzymes [BR:
yre01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HEC60_04575 (fadD)
Lipid biosynthesis proteins [BR:
yre01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HEC60_04575 (fadD)
Exosome [BR:
yre04147
]
Exosomal proteins
Exosomal proteins of breast milk
HEC60_04575 (fadD)
Exosomal proteins of breast cancer cells
HEC60_04575 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QIU88672
LinkDB
All DBs
Position
938556..940241
Genome browser
AA seq
561 aa
AA seq
DB search
MKKVWLNRYPADVPAEINPDRYQSLVELFEKATTRYADQPAFVNMGEVMTFRKLEERSRA
FSAYLQEGLGLQKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS
GAAAIVIVSNFAHTLEKVVAKTQVKHVILTRMGDQLSTAKGTLVNFVVKYVKRLVPKYNL
PDAISFRRALHQGYRMQYIKPEVGPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNG
TYGPLLHAGKELVVTALPLYHIFALTMNCLLFIELGGQNLLITNPRDIPGLVKELAKYPF
TAMTGVNTLFNALLNNKEFQQLDFSTLHLAAGGGMPVQSAVAERWVKLTGEYLLEGYGLT
ECAPLVSVNPHDIDYHSGSIGLPVPSTEVKLVDDDDNEVAPGEPGELCVKGPQVMLGYWQ
RPDATDEIIKNGWLHTGDIAVMDDEGFLKIVDRKKDMILVSGFNVYPNEIEDVVMQHPGV
QEVAAVGVPAGSSGETVKIFVVKKDPSLTEEALVAFCRRQLTGYKVPKLVEFRSELPKSN
VGKILRRELRDEARGKVDNKA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaggtttggctaaaccgctatccagccgatgttccggctgagataaatccagat
cgctatcaatccttggtggaactgttcgaaaaagcaaccactcgttatgcggatcagcct
gcgttcgtcaacatgggcgaagtgatgacattccgtaagctcgaagagcgcagccgtgcg
ttctctgcttacctgcaggaaggtctcgggttgcagaaaggcgatcgcgtggcgctgatg
atgcccaacctgctgcagtacccggtagcgctgttcgggatcctgcgtgccgggatgatc
gtggttaacgtgaacccgctatacaccccgcgcgagctggagcaccagctgaacgacagc
ggcgcggcggctatcgtgattgtttccaactttgcgcataccctggaaaaggtagtggca
aagacgcaggttaaacacgtgatcctgacccggatgggcgatcagctctcgaccgccaaa
ggcacgctggttaacttcgtggtgaaatacgtcaaacgactggtgccaaaatacaatctg
ccggatgctatttccttccgccgggcgctgcaccagggttaccgcatgcagtacatcaag
ccggaagtggggccggaagatctggcgttcctccagtacaccggcggtaccacgggcgtt
gctaaaggcgcgatgctgacgcaccgcaacatgcttgctaaccttgagcaggttaacggc
acctacgggccgctgttgcacgcagggaaagagctggtggtgacggcgctgccgctgtat
cacatttttgccctgaccatgaactgcctgctgtttatcgaactgggcgggcagaacctg
cttatcaccaacccgcgcgacatcccgggactggtgaaagagttagccaaatatccgttt
accgcgatgaccggggtcaacacgctgtttaacgcgctgctgaacaacaaagagttccag
cagctcgacttctccacgctgcatctggccgccggtggcggaatgccggtgcagagcgcg
gtggcggagcgctgggtcaaactgaccggtgagtatctgctggagggctacggcctgacc
gaatgtgcgccgctggtgagcgttaacccgcatgatatcgactaccatagcggcagcatt
ggtctgccggtgccgtcgaccgaagtgaagctggtggatgacgacgacaacgaagtggcg
ccaggcgaaccgggtgagctgtgtgttaaaggtccgcaggtgatgctcggctactggcag
cgcccggatgcgaccgatgaaatcatcaaaaatggctggctgcacaccggcgatatcgcg
gtgatggatgacgaaggcttcctgaagattgttgaccgtaagaaagacatgattctggtt
tccggtttcaacgtctacccgaacgaaattgaagacgtggtgatgcagcaccctggcgta
caggaagtggcggccgtcggtgttccggcgggctccagcggtgaaacggtgaaaatcttc
gtggtcaaaaaagacccgtcgctgaccgaagaagcgctggttgctttctgccgtcgtcag
cttaccggttacaaagtgccgaagctggtggagtttcgcagcgaactgccgaagtcgaac
gtcggaaagattttgcgacgagaattacgtgacgaagcgcgtggcaaagtggacaataaa
gcctga
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