Yokenella regensburgei: HEC60_05010
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Entry
HEC60_05010 CDS
T06519
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
yre
Yokenella regensburgei
Pathway
yre00010
Glycolysis / Gluconeogenesis
yre00020
Citrate cycle (TCA cycle)
yre00620
Pyruvate metabolism
yre00650
Butanoate metabolism
yre00720
Other carbon fixation pathways
yre01100
Metabolic pathways
yre01110
Biosynthesis of secondary metabolites
yre01120
Microbial metabolism in diverse environments
yre01200
Carbon metabolism
yre01210
2-Oxocarboxylic acid metabolism
Module
yre_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
HEC60_05010 (nifJ)
00020 Citrate cycle (TCA cycle)
HEC60_05010 (nifJ)
00620 Pyruvate metabolism
HEC60_05010 (nifJ)
00650 Butanoate metabolism
HEC60_05010 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
HEC60_05010 (nifJ)
Enzymes [BR:
yre01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
HEC60_05010 (nifJ)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_16
Fer4_6
Fer4_21
Fer4_10
Fer4_9
Fer4
Fer4_8
Fer4_2
Fer4_17
Fer4_18
Transketolase_C
Fer4_4
FlgM
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
QIU88756
LinkDB
All DBs
Position
complement(1032251..1035775)
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AA seq
1174 aa
AA seq
DB search
MITIDGNGAVASVAFRASEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDVPRVVEMQSE
AGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGQLTPFVLHVAARTVATHALSIF
GDHSDVMAVRQTGCAMLCAASVQEAQDFALISQMATLKSRVPFIHFFDGFRTSHEINKIV
PLADDTILNLLPQAEIDAHRARALNPDHPVIRGTSANPDTYFQSREATNPWYNAVYDHVQ
QAMDDFAAATGRQYHPFEYYGHPQAERVIVVMGSAIGTAEEVVDELQRHGEKVGVLKVRL
YRPFSAAHLIAALPESVCKIAVLDRTKEPGAQAEPLYLDVMTALAEAFNRGERETLPRVI
GGRYGLSSKEFGPDCVLAIFNELSADQPKPRFTVGIYDDVTNLSLPLPENTLPSTARLEA
LFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSDEPIRSAYL
VSQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYPADEVWARLPQEVQAVLNQKKARF
YVVNAAKIARECGLAARINTVMQMAFFHLTNILPGDSALIELQGAIAKSYSSKGQELVER
NWQALAMARDSLAEVPLQQVNASSPNRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALP
PDGTWPMGTTRWEKRNIAEEIPIWKEALCTQCNHCVAACPHSAIRAKVVAPEEMEHAPAS
LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEE
KVNYDFFLNLPEIDRTSLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRML
IANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRQRVMRL
LSQFSDSITPELNEALHAEATPEVRREQVAALRQQLAGVAGAEELLTDADALVEKSIWLI
GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRK
ARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAL
SHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSDALAETLMNEQRFRRLNAQQP
EVAEQLWKDAAADLQKRYDFLAQMAGKAEKSSSE
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgattactattgacggtaatggtgcagtcgcgtccgtcgcgttccgtgccagtgaagtt
atcgccatctacccgattacgcccagttccacgatggcggaacaggccgatgcctgggcc
ggtaatgggctgaaaaacgtttggggtgatgtcccccgcgtggttgagatgcagtcagag
gccggggctatcgctaccgtgcacggcgcactgcaaaccggcgcgctgtccacttcattt
acttcctcacaaggtttgctgttgatgatcccgacgctgtacaagctcgcgggtcagtta
acgccttttgttttacacgtcgctgcacgtactgtcgccacccacgcactgtctatcttc
ggcgatcactctgacgtcatggcggtacgccagacgggctgcgcgatgctctgcgcggca
agcgtgcaggaagcgcaggatttcgcgttaatctcgcagatggcgacgctgaaaagtcgc
gtgccatttattcatttctttgatggtttccgcacctcgcacgaaatcaacaagattgtc
ccgctggcggacgacaccattttgaacctgctgccgcaggcggaaatcgacgctcaccgt
gcccgggcgctgaacccggatcacccggtgattcgcgggacctctgctaacccggatacc
tatttccagtcccgcgaggcgacaaacccgtggtacaacgcggtgtacgatcacgtacag
caggcgatggacgattttgccgccgcaacgggccgtcagtaccacccgttcgagtattac
ggtcatccgcaggctgagcgcgtgatcgtggtgatgggctctgccatcggtaccgccgaa
gaggtggtggacgaacttcagcgccatggagagaaagtcggcgtgctgaaagttcgcctc
tatcgcccattctctgccgctcacctgattgccgccctgccggaaagcgtctgtaaaatt
gcggtgctcgaccgcaccaaggagcccggcgcgcaggcagaaccgctgtatcttgacgtg
atgaccgcgctggcggaagccttcaaccgtggcgaacgtgaaacgctgccgcgcgttatt
ggcggccgttatgggctttcctcaaaagagtttggtccggactgcgtcctggcgattttc
aacgagctgagcgctgaccagccgaagccgcgcttcaccgtcggcatttatgatgacgtc
actaatctctccttgccgctgccggaaaacaccctgccctcaaccgcgcgcctggaagcg
ctgttctacggccttggcagcgacggcagcgtgtcggcgaccaagaacaacatcaagatt
attggtaactctacgccgtggtacgcccagggttatttcgtctatgactccaaaaaggcc
ggcggtttaaccgtttcacacctgcgcgtcagcgatgaaccgatccgctccgcctacctg
gtatcacaggctgatttcgtcggctgccaccagctgcagtttatcgataagtatcagatg
gccgagcgcctgaagcccggcggtattttcctgctcaacacgccctatccggctgatgaa
gtctgggcgcgactgccgcaggaagttcaggccgtgctgaaccagaagaaggcgcgtttc
tacgtggtgaacgccgctaaaatcgcccgtgaatgcggcctggcggcgcgtatcaacacc
gtcatgcagatggcatttttccatctgaccaacattctgccgggcgacagtgcgctcatc
gaactgcagggcgctatcgccaaaagctacagcagcaaaggtcaggagctggttgaacgc
aactggcaggcgctggcaatggcgcgcgattcactcgcagaggtgccgctgcagcaggtc
aacgccagcagcccgaaccgcccgccggtggtttccgatgccgctcccgatttcgtcaaa
accgttaccgccgcgatgcttgctggcctcggcgatgcgctgccggtttccgcgttgccg
cctgatggcacctggccgatgggcaccacccgctgggaaaaacgcaacatcgccgaagag
atccctatctggaaagaagcgctgtgcacccagtgtaaccattgcgtcgccgcctgcccg
cactcagctatccgcgcgaaggtcgtcgccccggaagagatggagcacgcccctgccagt
ctgcattcactggacgtaaaatcccgtgatatgcgcggtcagaaatatgtgctgcaggtc
gccccggaagactgcaccggctgtaacctgtgcgtagaagtctgcccggcgaaagaccgt
cagaatccggagatcaaggccatcaatatgatgtcccgccttgagcatgttgaagaagag
aaagtgaactacgacttcttcctcaatttgccggaaatcgatcgcaccagcctggagcgc
atcgatattcgaacctctcagctcattaccccgctgtttgagtactctggtgcctgctcc
ggttgcggtgaaaccccgtacattaagctgctgacccagctgtatggtgaccggatgctg
attgccaacgccaccggctgttcttctatttatggtgggaacctcccctctacgccatac
accaccgacgccaacggtcgcggcccggcgtgggcgaactcactgttcgaggataacgcc
gaatttggtcttggtttccgcctgacggttgaccagcatcgccagcgcgtgatgcgcttg
ctctcgcagttcagcgatagcattacgccagaactcaatgaggcgctgcacgccgaggcc
acgccggaagtacgccgggagcaggttgcggcgctgcgccagcagctggcgggcgttgcc
ggtgccgaagaactgcttaccgacgccgatgcgctggtggagaaatccatctggctgatt
ggcggggacggttgggcgtatgacatcggctttggtggccttgatcacgttctgagcctc
accgagaacgtcaacattctggtgctggatacgcagtgctattccaacaccggcggccag
gcctcgaaggcgactccgctcggtgcggtcaccaagtttggcgaacacggcaagcgtaaa
gcgcgtaaagatctcggcgtcagcatgatgatgtatggccacgtctatgtggcgcagatc
tccctcggcgcccagctgaaccagacggtgaaagcgattcaggaagccgaggcttatcct
ggcccatcgctgatcattgcctacagcccgtgcgaggagcatggctacgatctggcgctg
agccacgatcaaatgcgtcagctcaccgctaccggtttctggccgctgtaccgcttcgac
ccacgtcgtgcggatgagggcaaactgccgctggcgctggactctcgtccgccgtcagat
gcgctggctgagacgctgatgaatgagcaacgtttccgtcgcctgaacgctcagcagccg
gaagtggccgagcagctgtggaaagacgccgcagcggatctgcaaaaacgctatgacttc
ctcgcacaaatggcgggaaaagcagagaagtcatcctctgaataa
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