Yokenella regensburgei: HEC60_05100
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Entry
HEC60_05100 CDS
T06519
Name
(GenBank) adhesin
KO
K21449
trimeric autotransporter adhesin
Organism
yre
Yokenella regensburgei
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yre02000
]
HEC60_05100
Transporters [BR:
yre02000
]
Other transporters
Pores ion channels [TC:
1
]
HEC60_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
ESPR
Motif
Other DBs
NCBI-ProteinID:
QIU88773
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All DBs
Position
1057258..1061064
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AA seq
1268 aa
AA seq
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MNKIYRLVWSHRLQATVIAPETARGKGKSGLVSKVVSIVGIAVLASQNALAFAPIGTGAT
STTVTSPGAAGNLVIGDNASATNSIQTCGNPDDILGNPYLNGGCASSTVIGNNATNNGFA
ASLVLGESAQVTGTGSTAIGSLSTAATNALAAGFGAEASANGSTALGQGSLASGINSVAI
GKGAFTYGDQSIALGINAGVGEGTNPIPGSTFGNQGDNIAIGDNAGNTVLGAKNVALGRS
SGSNVSGNENTAFGSGTGSNIYGFDNVAFGPNSGNNITGGAFDTGNNNTAVGPHSGNDVA
GGGNVAVGQDAGNSVNANQTVSIGHVANAGGDASIAIGNNSSVSAGVTNAIAQGTSTTVS
GNSSIGIGEAANITGIQSVGIGYHSTIAGNNSYAIGSSNTVNSNNVAVLGNNITVAIGLD
NSVVLGSGSSVAAAVGTSSTTLNGQQYNFAGVSPNASVSIGTTTSQRTLTNLAAGRINSL
STDAVNGSQLFASNTAINNLGDNLNTLDSQAVKYDLNPDNSVNYNSVTMGGTTYDNSTHT
GGTTITNVADGTAPSDAVNFSQLTQTNTQIANIYNTGTKYFHANSTGTDSSALGLDAVAI
GLSAVANHDNDVALGANSVTGTTTGTTGVTLLGTQYSFAGTTPASQVSVGSVGNERLVTN
VAAGNLSDTSTDAVNGSQLFSTNTALTTLGDSLAALDTGSVKYDRNPDNSVNYNSVTMGG
TNYDNSTHTGGTTITNVADGAAPSDAVNFSQLTQTNTQIANIYNTGTKYFHANSTGTDSS
ALGLDAVAIGLSAVANHDNDVALGANSVTGTTTGTTGVTLLGTQYSFAGITPASQVSVGS
VGNERLVTNVAAGNLSDTSTDAVNGSQLFATNTALNGVSTLVGSLQQDALLWDSALGGFS
ASHGGTVINKITNVAPGTLSPTSTDAVNGSQLNQTNQNVTNLDNRVTNVENVVNNNPLNR
YVKVNSTGPAASATGSDAVAVGQGTDASGNDTVAIGNGASSTADNAVALGAGSVANRENS
VSVGSKGNERQITNVAAGTEDTDAVNVAQLRSATGDITEVKNIENNLVSGRDGMFQVNNS
SNLPKPVVSGNDAVAGGAGSEASGNNSTALGTRSKATANNSVALGSDSVADRANTVSVGS
VGNERQIANVAAGTQGTDAVNLNQLNKGISSANDYTDKRFGDLKNMVDERDDKLSAGIAG
AMAMASLPQPYSAGGSMVGIGGGTYQGQSAVSLGVSTISDNGKWVTKLSGTTNSQGDLGA
AVGVGYQW
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatatatcgattagtctggagtcatcgcttgcaagcgacggtgattgcgcct
gaaaccgccagagggaaaggtaaaagcggattagtttcgaaagtggtttctatcgtgggt
attgccgtactcgccagtcagaatgcattagcttttgcgccgattggaacgggagcgacc
tccacgacggtgacttcacctggggctgcgggaaatctggtgattggcgataacgcctct
gcgacaaactccatacaaacatgtggtaatcctgacgatattctgggtaacccttattta
aatggcgggtgcgcatcttcaaccgtcattggcaataatgcaaccaataacgggtttgcc
gcatccctggtgctgggtgaaagtgcccaggtgaccggtaccggttcaaccgctattggc
tcattaagtacggctgccactaacgcactggccgcgggttttggcgctgaagcttcggct
aatggctcaacggcgctgggtcaggggagcctggcatcgggtattaattccgtggctatc
ggtaaaggggcatttacctacggcgatcagagtattgcgctgggtattaatgccggcgtc
ggggaaggcacaaaccctattccgggctctacctttggtaatcagggcgataatatcgct
atcggtgataatgcaggtaataccgttctgggggcaaaaaacgttgcgctggggagatcc
agtggttcgaatgtgtcggggaatgaaaataccgcttttggttctggtactggttccaat
atttacggcttcgataacgtcgcctttggccctaactcaggaaataatatcaccggtgga
gcatttgatactggtaataacaacacggcagtgggcccccattcaggaaatgacgttgcg
ggcggtggtaacgttgccgtaggtcaggatgcgggaaatagtgtcaacgctaaccagacc
gtaagtattggtcacgtggctaatgccggcggggatgcctctattgcgattggtaataac
tcttcggtcagcgcgggtgtcaccaacgccatcgcgcaggggacatccaccaccgtttcc
ggtaactcgagtatcggcatcggtgaagccgccaatataacgggtatacagtccgtaggt
attggttatcactcgactatcgcaggaaataatagctacgcgattggttcaagtaacaca
gtcaattctaataacgttgcggtgcttgggaacaatattaccgtcgcgatcgggctggat
aattcggtggtgttggggtcaggatcaagcgttgctgctgctgtagggacatcgtcaacg
accctgaatggtcaacagtacaattttgccggcgtctcaccgaatgcttccgtcagtatt
ggcaccacaacctcccagcgtaccttaaccaatctggcggcagggcggattaacagcctg
agtaccgacgcggtgaacggcagccagttgtttgcgtccaacaccgctatcaataatctg
ggcgataatctgaacacgcttgattcccaggcggtgaaatacgatctcaacccggacaac
tccgtcaattacaacagcgtgacaatgggtggcacgacctacgataacagcacccatacc
ggcggtacgaccattaccaacgtggcggatggcactgcgccgagcgatgcggttaacttc
tcacagctgacgcaaaccaatacccagattgccaatatctacaacacgggcaccaaatac
ttccacgccaattccaccggaacggattcgtccgcgctgggtctggatgcggtggcgatt
ggcctgagcgcggtggccaatcatgacaacgatgtggccctgggcgcaaactccgtaacc
ggcacgacaacgggtactaccggcgtcacgctgcttggcacacagtactccttcgctggc
accacaccagcgagccaggtcagtgtaggctccgtgggcaatgaacgtctggtgaccaac
gtggcggcgggcaacctgagcgacaccagcaccgacgcggtgaacggctctcagctcttt
agcaccaacaccgcgctgacgacgctgggcgatagtctggcagcgctcgataccggctcg
gtcaaatacgatcgtaacccggacaactccgtcaactacaacagcgtgacgatgggtggc
acgaactacgataacagcacccataccggcggtacgaccattaccaacgtggcggacggt
gctgcgccgagcgatgcggtgaatttctcacagctgacgcaaaccaacacccagattgcc
aatatctacaacacgggcaccaaatacttccacgccaattccaccggaacggattcgtcc
gcgctgggtctggatgcggtggcgatcggcctgagcgcggtggccaatcatgacaacgat
gtggccctgggggcgaattccgttaccggcacgaccacgggtactaccggcgtcacgctg
cttggcacacagtactccttcgctggcatcacaccagcgagccaggtcagcgtaggctcc
gtgggcaatgaacgtctggtgaccaacgtggcggcgggcaacctgagcgacaccagcacc
gatgcggtcaacggtagccaactgtttgccaccaatactgcactgaacggcgtgtcgacg
ctggtgggttcattacagcaggatgcgctgctttgggattctgcgctgggtggctttagc
gccagccatggcggaacggttatcaacaaaattaccaacgtcgcgccagggacgctttcg
ccaaccagcaccgatgcggttaacggttcacagttgaatcaaaccaaccagaacgtcact
aacctcgataaccgcgtcacaaatgtagaaaacgtggtgaataacaacccactcaaccgc
tatgtgaaggttaactctaccggccctgcggccagcgcgacggggagcgatgctgtcgcg
gttggtcagggaaccgatgcttctggtaatgacacggttgctattggtaacggtgcctcc
tcaacggcagacaatgcggttgcattaggggcgggttcggtcgccaatcgtgagaacagc
gtttccgttggttcgaaggggaacgagcggcaaatcaccaacgttgcggcgggaacggag
gataccgatgcggttaacgttgctcagttgcgctcggcaaccggggatattaccgaagtt
aagaatattgaaaacaatctggtttcgggccgtgatggcatgttccaggtcaacaactcc
agcaatctgcctaagcccgtggtaagcggaaacgatgcggttgctggtggtgcaggatct
gaagcgtcgggtaacaacagcaccgcgttagggacgcgttcgaaagcgacggcaaacaac
agcgttgcgctggggagtgactctgtcgccgaccgggcaaataccgtttctgtaggctct
gtcggtaatgagcggcagatagctaacgtcgcggcagggacgcagggtactgatgccgtc
aaccttaatcagttgaataaagggatcagcagcgccaacgattacaccgacaaacgattc
ggcgaccttaaaaacatggtcgatgagcgtgatgacaaactgagcgcggggattgcgggc
gcaatggcgatggcgtccttgcctcagccttatagcgcaggtggcagtatggttgggatc
ggtggtggtacttaccagggacagtcagcggtatcgcttggagtatcaaccatttcggat
aacggcaaatgggtaacaaaactttcaggaaccactaacagccagggcgaccttggtgcg
gctgtcggagtgggttatcagtggtaa
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