Yokenella regensburgei: HEC60_06555
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Entry
HEC60_06555 CDS
T06519
Name
(GenBank) TetR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
yre
Yokenella regensburgei
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yre03000
]
HEC60_06555
Transcription factors [BR:
yre03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
HEC60_06555
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_13
TetR_C_13_2
TetR_N
TetR_C_11
TetR_C_24
DUF5943
AT_hook
Motif
Other DBs
NCBI-ProteinID:
QIU89038
LinkDB
All DBs
Position
complement(1373021..1373689)
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AA seq
222 aa
AA seq
DB search
MSSELSANSPTDSATPRRKRGRPPKAVSVQLDVKRTIIRTGVEVLTESPFSASSLDYILK
RAGVPKGSFYYYFESKEAFGMAVLEQYDSFFARLLQRTLGDETRLPLDRIAAFVDAAASG
MAKYQFNRGCAVGNLAHEVATLPPAFRQKLMQVFDQWEASLAVCLRDAVAAGQIAHHVDI
NIQASFFWTGWEGAVLRARLEQTRRPLDLFLQGFIAGLSVSN
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgaactctctgcgaatagcccaacggacagcgcgacgcctcgcaggaaacgc
ggacgcccaccgaaagcggtctccgtacagcttgatgtgaagcgcactatcatccgcacc
ggagtggaagtgctgaccgagtcaccgttcagcgccagcagccttgattacatcctcaaa
cgtgccggcgtcccgaaaggctctttctattactattttgagagtaaagaagccttcggg
atggcggtgcttgaacagtacgacagttttttcgcgcgactccttcagcgtaccctgggt
gacgaaacccgtttaccgctcgacaggatcgcagcctttgtggatgcggccgcctcagga
atggcgaagtatcagttcaatcgcgggtgtgcggtgggcaacctggcgcatgaggtggca
acacttccgccagcgtttcgccagaaattaatgcaggtctttgatcaatgggaagcgtcg
cttgcggtgtgcctgcgtgacgccgtggcagcagggcagatagcgcaccatgttgatatc
aacattcaggcttcgttcttctggaccggctgggaaggggcagtgctccgtgcccgttta
gaacaaacccgccgcccgctggatctctttctgcagggctttatcgccgggctttccgtc
agtaactaa
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integrated database retrieval system
