Yokenella regensburgei: HEC60_06770
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Entry
HEC60_06770 CDS
T06519
Name
(GenBank) L,D-transpeptidase family protein
KO
K19234
L,D-transpeptidase YnhG
Organism
yre
Yokenella regensburgei
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yre01002
]
HEC60_06770
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yre01011
]
HEC60_06770
Peptidases and inhibitors [BR:
yre01002
]
Cysteine peptidases
Family C82
HEC60_06770
Peptidoglycan biosynthesis and degradation proteins [BR:
yre01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HEC60_06770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
QIU89076
LinkDB
All DBs
Position
complement(1415280..1416284)
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AA seq
334 aa
AA seq
DB search
MIRASFSTLTLIGALSAFSSAWALDYPLPPAGSRLIGHNQTYTVQEGDKNLQAIARRFDT
GAMLILEANNTIAPVPKAGTTVTIPTQLLLPDAPREGIIVNLAELRLYYFPPGENIVQVF
PIGIGLQGLETPVMETRVGQKIPNPTWTPTPGIRKRSLEKGINLPPVVPAGPNNPLGRFA
LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIQALFSQVRTGTPVRVINEPVKYS
VEPDGKRYVEVHRPLSPEEEQNVQTMPYVLPAGFTAFKESKAVDHALVEKALYRRAGYPV
VVSTGQSPVASNGSVESAQNVSPVNSAEGRAMQE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgataagagcgtctttcagtacactaacacttataggcgccctgagcgccttctcctcc
gcctgggcgttggattaccccttgccgcctgcgggcagccgtctcattggacacaatcaa
acctacaccgtacaggagggggataaaaacctgcaggctattgcccgacgctttgatacc
ggggcgatgctgatcctcgaggccaacaacacgattgcgcccgtgcctaaggcgggcact
accgtcaccattcccacccagttactgttaccggatgctccacgcgaggggattatcgtg
aaccttgctgaactgcggctctattacttcccgccgggtgaaaacatcgttcaggtgttc
ccgatcggtatcggcctgcaggggctggaaacgccggtgatggagacgcgggtcgggcaa
aaaatcccgaatccaacctggacgccgacgccggggatccgcaaacgctcgctggagaaa
gggataaacctgccccctgtggtgccagcagggccaaataaccccctgggacgctttgca
ctgcgtctggcgcacggcaatggcgaatacctcatccatggcaccagtgcgccggacagc
gtcggtctgcgcgttagttcgggctgcatccgcatgaatgccccggatatccaggcattg
ttttcacaggtgcgcaccggaacgccggtgagggtgattaatgaaccggtgaaatactcg
gttgagcctgacggtaaacgctatgtcgaagtgcaccgtccgctgtcgccggaagaggaa
cagaacgtgcagacgatgccgtatgtccttcctgccgggtttaccgcgtttaaagagagt
aaagcggtagatcatgcgctggtagaaaaagcgctgtaccgtcgtgccgggtatccggtg
gtggtctccacggggcagtcgccggtagccagtaacggctcagttgagtcggcgcagaat
gtctcgccggtgaatagtgctgaaggacgcgcaatgcaggagtga
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