Yokenella regensburgei: HEC60_07175
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Entry
HEC60_07175 CDS
T06519
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
yre
Yokenella regensburgei
Pathway
yre00541
Biosynthesis of various nucleotide sugars
yre01100
Metabolic pathways
yre01250
Biosynthesis of nucleotide sugars
Module
yre_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HEC60_07175 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yre01005
]
HEC60_07175 (kdsA)
Enzymes [BR:
yre01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HEC60_07175 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
yre01005
]
Lipid A
HEC60_07175 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QIU89149
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Position
complement(1499697..1500551)
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AA seq
284 aa
AA seq
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MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEASQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTNAVINVKKPQFVSPGQMGNIVDKFREGGNEKVILCDRGANFGYDNLVVD
MLGFSVMKKVSGNSPVIFDVTHALQCRDPFGAASSGRRAQVTELARAGMAVGLAGLFIEA
HPDPEHAMCDGPSALPLDKLEPFLKQMKAVDDLVKSFGDLDTSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagaaagtggtaagcattggcgatatcaacgtagcaaatgacctgccgttcgtg
ctgtttggcggcatgaacgtgctcgagtcacgcgacctcgcgatgcgtatctgcgaacac
tacgtcaccgtgacccagaaactggggatcccgtacgtgttcaaagcctcttttgataag
gccaaccgttcctctatccactcttaccgtggcccgggcctcgaagaagggatgaagatt
ttccaggagctgaagcagaccttcggcgtgaaaatcatcactgacgttcacgaagcctct
caggctcagccggttgccgacgtggtggatgtgattcagctgccggcgttcctggcgcgt
cagactgacctcgtggaagccatggcgaaaaccaacgccgttatcaacgtgaaaaaaccg
cagttcgtaagccctggtcagatggggaacatcgtggataaattccgcgagggcggcaac
gagaaggttatcctttgcgatcgcggtgcaaacttcggctacgacaacctggtggtcgac
atgctgggctttagcgttatgaagaaagtctctggcaactcgccggttattttcgacgtg
acccacgccctgcagtgccgtgacccgtttggtgcagcttccagcggccgtcgtgcgcag
gtcaccgaactggcgcgcgcgggcatggcggtaggtctggcaggtctgttcattgaagcg
cacccggatccggaacacgctatgtgcgatggcccgtccgcgctgccgctcgacaaactt
gagccgttcctgaagcaaatgaaagcggttgacgatttggtcaaaagcttcggcgatctg
gataccagcaagtaa
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