Yokenella regensburgei: HEC60_09870
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Entry
HEC60_09870 CDS
T06519
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
yre
Yokenella regensburgei
Pathway
yre00521
Streptomycin biosynthesis
yre00523
Polyketide sugar unit biosynthesis
yre00525
Acarbose and validamycin biosynthesis
yre00541
Biosynthesis of various nucleotide sugars
yre01100
Metabolic pathways
yre01110
Biosynthesis of secondary metabolites
yre01250
Biosynthesis of nucleotide sugars
Module
yre_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HEC60_09870 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HEC60_09870 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HEC60_09870 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HEC60_09870 (rfbB)
00525 Acarbose and validamycin biosynthesis
HEC60_09870 (rfbB)
Enzymes [BR:
yre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HEC60_09870 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QIU89584
LinkDB
All DBs
Position
complement(2000226..2001308)
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AA seq
360 aa
AA seq
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MKILVTGGAGFIGSAVVRHIINDTQDSVVNVDKLTYAGNLESLADVAHSDRYRFEHADIC
DSDAMARIFAEHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEASRQYWSSLSA
EKKTAFRFHHISTDEVYGDLPHPDEVAKGSELPLFTEKTAYAPSSPYSASKASSDHLVRA
WLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPVYGKGDQIRDWLYVEDHA
RALYTVVTQGKIGETYNIGGHNEKQNLDVVHTICSLLDEIVPKEGSYRDQITYVADRPGH
DRRYAIDAEKIGLELGWKPQETFESGIRKTVEWYLTNTQWVENVKSGSYKSWIEENYQNR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattctggtcactggtggggcaggctttattgggtctgcagtggtacgacatatt
atcaatgatacgcaggattccgtggtcaatgtcgataagctgacttatgcaggcaatctt
gaatcgctggccgacgtcgcgcacagcgatcgctatcgttttgaacatgccgacatctgc
gacagtgatgcgatggcgcgtatttttgccgagcaccagccggatgccgtgatgcatctg
gcggcagagagccacgttgatcgttcgatcaccggtccggcagcttttatcgaaaccaac
attgtgggtacctacgtactgctggaagccagtcgccagtactggtcatcattaagcgct
gagaagaaaaccgcattccgtttccaccatatctctactgatgaagtgtatggtgacctt
cctcacccagatgaagtagcgaagggcagtgaactgccgctgtttaccgaaaaaacagcc
tacgcaccgagcagtccttactccgcatcaaaagcctccagtgaccacctggttcgcgcc
tggctgcgtacctacggtttcccgaccattgtgaccaactgttctaacaactacggtcct
taccacttcccggaaaaactgatcccattggttatcctcaacgccctggaaggcaaatcc
ctgccggtttacggtaaaggcgatcagatccgcgactggttgtacgttgaagaccacgcg
cgcgcgctttataccgtggtgacacagggtaaaattggtgaaacctacaacatcggcggc
cacaacgagaagcaaaatctggatgtggtgcacactatctgctccctgctggatgaaatt
gttccgaaagaaggctcctatcgcgaccagataacttacgttgctgaccgcccgggacac
gatcgccgctacgccattgatgccgagaaaattggtctggaattgggctggaaaccgcag
gaaaccttcgaaagcgggatccgcaaaacggtggaatggtatctgaccaacacccagtgg
gtagagaacgtgaaaagcggcagctacaagtcgtggattgaagaaaattaccagaatcgc
taa
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