Yokenella regensburgei: HEC60_10000
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Entry
HEC60_10000 CDS
T06519
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
yre
Yokenella regensburgei
Pathway
yre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEC60_10000 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yre03400
]
HEC60_10000 (alkA)
Enzymes [BR:
yre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HEC60_10000 (alkA)
DNA repair and recombination proteins [BR:
yre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HEC60_10000 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QIU89609
LinkDB
All DBs
Position
complement(2033708..2034556)
Genome browser
AA seq
282 aa
AA seq
DB search
MYTLRWQPPYDWAWMFGFLEMRAVEGVEVFSDGRYMRSFSLDGHRGLITLEPDDAAHLLR
VTLSEGLHPVATECLVRIAQLFDLHCEPQKVAQALGTLGEARPGLRLPGAMDAFEQGVRA
ILGQLVSVAMAAKLAGKVVQLCGDALEEAPGFYCFPTPEQLVKADPLALKALGMPVKRAE
ALIHLAQAALSGALPLRAPADVELAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAKRWQPWRSYALLHIWYTEGWVPDVS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtacacattgcgctggcagcccccctatgactgggcatggatgtttggctttctggaa
atgcgtgccgtagaaggcgttgaggtgttcagcgacgggcgctacatgcgcagtttctcg
ctcgatggccaccgcgggttaattacactcgaaccggacgacgccgcgcatttgctgcga
gtgaccttgagcgaagggctgcacccggtggcaacggaatgtctggtgcgtattgcgcag
ctgttcgatctccactgtgagccgcagaaggtggcacaggcgctgggaacgcttggcgaa
gcacgtcccggtctgcgcctgcctggcgcaatggatgcgtttgaacagggcgttcgcgcg
atcctcgggcaactggtgagcgtggcgatggcggcgaagcttgccggtaaagtggtgcag
ctgtgcggtgatgctctggaagaggcgccgggtttttactgcttccccacgccggaacag
ttggtgaaggccgatccgctggcgttaaaggcgctcgggatgccggtgaaaagggcagaa
gcgcttatccatctggcgcaggcggcgctttccggtgcgttgcctttgcgagcgcctgcc
gatgtggagctggcgatgaaaaccctgcaaacttttccggggattggccgctggacggct
aactactttgctctgcgcggctggcaggcgaaggatgtgtttctgccggatgattatctt
atcaagcagcgtttccccggcatgacccccgcgcaaatccgtcgctacgctaaacgctgg
cagccctggcgctcctatgcgctgctgcacatctggtacaccgagggctgggtacccgac
gttagttga
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integrated database retrieval system
