Yokenella regensburgei: HEC60_10370
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Entry
HEC60_10370 CDS
T06519
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
yre
Yokenella regensburgei
Pathway
yre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEC60_10370 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yre03400
]
HEC60_10370 (nfo)
Enzymes [BR:
yre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HEC60_10370 (nfo)
DNA repair and recombination proteins [BR:
yre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HEC60_10370 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QIU89681
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All DBs
Position
2118437..2119294
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AA seq
285 aa
AA seq
DB search
MKYIGAHVSASGGVANAAIRAAEIGATAFALFTKNQRQWRAAPLTDDVISEFKAACEKYQ
FGPGQILPHDSYLINLGHPVTEALEKSREAFIDELYRCQQLGLTLLNFHPGSHLMQIPEE
ECLARIAQSINIALAQTEGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTTEACEETFAEFDRIVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG
HDAFRWIMQDNRFDGIPLILETVNPDIWAEEIAWLKAQQVAEAVA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacattggagcgcacgtgagtgcttcaggcggtgtggctaacgccgcaatccgc
gccgcagaaattggagcgaccgcattcgccctgtttaccaagaaccagcgccagtggcgt
gccgccccccttactgacgatgtcatcagcgagttcaaagccgcctgtgaaaaataccag
tttgggccaggccagatcctccctcacgacagctacctgattaacctgggtcacccggtt
accgaagcgctggagaaatcccgcgaagcgtttatcgatgagctctaccgctgccagcag
ctggggctgacgttgctgaacttccaccccggtagccacctgatgcagatcccggaggaa
gagtgcctggcgcggattgcacaatccatcaacattgcgctggcacaaaccgaaggcgtc
actgcggtcattgaaaacaccgccggtcagggcagcaacctcggttttaaatttgaacac
ctggcagccatcatcgacggagtggaagataaatcccgcgtcggcgtctgtatcgatacc
tgccatgcctttgctgccgggtacgacctgcgcaccaccgaagcctgtgaagaaacgttt
gctgaattcgatcgcatcgtcggctttaagtatctgcgtgggatgcatctgaacgacgcc
aagagcactttcggcagccgcgttgaccgccaccacagcctcggtgaaggcaacattggt
cacgatgcgtttcgctggataatgcaggacaaccgttttgacggcattccgctgattctg
gaaaccgtaaatccggatatctgggcagaggagattgcgtggctgaaagcgcagcaggtc
gccgaagcggtggcataa
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