KEGG   Yokenella regensburgei: HEC60_10540
Entry
HEC60_10540       CDS       T06519                                 
Symbol
alkB
Name
(GenBank) DNA oxidative demethylase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
yre  Yokenella regensburgei
Brite
KEGG Orthology (KO) [BR:yre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yre03400]
    HEC60_10540 (alkB)
Enzymes [BR:yre01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     HEC60_10540 (alkB)
DNA repair and recombination proteins [BR:yre03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    HEC60_10540 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-ProteinID: QIU89713
LinkDB
Position
complement(2157119..2157769)
AA seq 216 aa
MLDLFADEEPWQEALADGAVILRRFACAEAGELLTAISAVASVSPFRQMVTPGGYTMSVA
MTNCGARGWATDRHGYLYATQDPQTGSPWPAMPALFRAFAVRAALAAGYPDFYPDACLIN
RYAPATKLSLHQDKDEATLLAPIVSVSLGLPAIFQFGGLRRNDPLKRVLLEHGDVVVWGG
ASRLFYHGIQPLKEGHHPLTDAFRYNLTFRTTGLSE
NT seq 651 nt   +upstreamnt  +downstreamnt
atgcttgatctgttcgccgatgaggaaccctggcaggaggcgcttgccgacggcgcggtg
atcctgcgccgctttgcctgcgccgaggccggggaacttctcactgccatcagcgcggtg
gcgagcgtgtcgccgtttcgccagatggtaacgcccggcgggtataccatgtcggtggcg
atgaccaattgtggcgcgcggggctgggccaccgatcggcacggctatctgtacgccacg
caggatccgcaaaccggcagcccgtggcctgctatgcctgcgctatttcgcgcttttgcc
gtgcgggccgcgctggcggccggttatcccgatttttacccggatgcctgtcttatcaac
cgctacgccccggcgacgaagctctcgctccatcaggacaaagacgaggccacgctgctg
gcgcctatcgtttcggtctcgcttgggcttcctgccatcttccagtttggcggactacgg
cgcaatgatccgttgaagcgggtattgctggagcacggtgacgtcgtggtgtggggtggg
gcgtcgcggcttttctatcacggtattcaaccgctcaaagaggggcatcacccgcttacc
gatgcgtttcgctataacctgaccttccgtaccaccggacttagtgaataa

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