KEGG   Yokenella regensburgei: HEC60_12155
Entry
HEC60_12155       CDS       T06519                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
yre  Yokenella regensburgei
Pathway
yre03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:yre00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HEC60_12155 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yre03019]
    HEC60_12155 (rnc)
   03009 Ribosome biogenesis [BR:yre03009]
    HEC60_12155 (rnc)
   03036 Chromosome and associated proteins [BR:yre03036]
    HEC60_12155 (rnc)
Enzymes [BR:yre01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HEC60_12155 (rnc)
Messenger RNA biogenesis [BR:yre03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HEC60_12155 (rnc)
Ribosome biogenesis [BR:yre03009]
 Eukaryotic type
  90S particles
   RNase
    HEC60_12155 (rnc)
 Prokaryotic type
  rRNA processing factors
   HEC60_12155 (rnc)
Chromosome and associated proteins [BR:yre03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HEC60_12155 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2 DND1_DSRM
Other DBs
NCBI-ProteinID: QIU90009
LinkDB
Position
complement(2510558..2511238)
AA seq 226 aa
MNPIVINRLQRKLGYTFHHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEQLILSWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttcatcatcag
gagttattgcaacaggcattaacccatcgcagtgccagcagtaaacataacgagcgcctg
gaatttctcggtgactccattttaagttatgtcattgctaacgcgctgtaccaccgcttc
ccgcgcgtcgacgaaggcgatatgagccggatgcgcgcaacgctggttcgcggcaacacg
ctggcagaaattgcccgcgagtttgaactgggcgagtgcctgcgcttagggcctggcgaa
ctgaagagcggcggtttccgtcgtgaatcgattctggcggataccgtagaagccttaatt
ggtggcgtgttccttgacagcgatattcagaccgtcgagcaactgatcctctcctggtac
cagacgcgtctggacgaaattagcccgggcgataaacaaaaagatccgaaaacccgtttg
caggaatatttgcagggtcgccatcttccgctgccgtcgtatctggtggtgcaggttcgt
ggcgaagcacacgatcaggaatttactatccactgccaggtcagtggcctgagtgaaccc
gtcgtaggtaccggttccagccgtcgcaaggcggagcaggctgccgccgaacaggcgctg
aaaaaactggagctggaatga

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