Yokenella regensburgei: HEC60_12215
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Entry
HEC60_12215 CDS
T06519
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
yre
Yokenella regensburgei
Pathway
yre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEC60_12215 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yre03400
]
HEC60_12215 (ung)
Enzymes [BR:
yre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HEC60_12215 (ung)
DNA repair and recombination proteins [BR:
yre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HEC60_12215 (ung)
Prokaryotic type
HEC60_12215 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QIU90021
LinkDB
All DBs
Position
2522106..2522795
Genome browser
AA seq
229 aa
AA seq
DB search
MTTSLTWHDVLADEKQQPYFVNTLQTVANERQSGMTIYPPQKDVFNAFRYTELGEVKVVI
LGQDPYHGPNQAHGLAFSVQPGVATPPSLLNMYKELEATIPGFTRPNHGYLESWARQGVL
LLNTVLTVRAGQAHSHASLGWETFTDKVISLINEHREGVVFLLWGSHAQKKGAIIDQQRH
HVLKAPHPSPLSAHRGFFGSNHFVLTNEWLSQRGEMPIDWMPVLPANEG
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctctttaacctggcacgatgtccttgctgacgaaaaacagcagccctatttt
gtaaacaccctgcagacggttgcgaacgagcgccagtccgggatgaccatttacccgccg
cagaaagatgtgtttaacgcgtttcgttatacggaactgggtgaggtaaaagtcgttatc
ctgggtcaggatccttatcacggcccaaaccaggcgcacgggctggcgttttccgtgcag
ccaggtgtcgctaccccaccctctttgctcaatatgtataaagagcttgaggcgacgatc
cccggctttacccgaccaaaccacggttatctggaaagctgggcacgccagggcgtgctg
ctactgaacaccgtgttgaccgtacgtgccggacaggcgcattcccatgcctctctgggc
tgggagacgtttaccgataaagtgattagcctgattaacgagcatcgcgaaggcgtggtg
ttcctgctgtggggttcacacgcgcagaagaaaggggccattatcgaccagcagcgtcac
cacgtgctgaaagcgccacacccgtcaccgctctcggcgcaccgcggtttcttcggttca
aaccattttgttctgacgaatgagtggctgtcgcagcggggtgaaatgccaattgactgg
atgccggtgctaccggcaaacgaagggtaa
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