Yokenella regensburgei: HEC60_13795
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Entry
HEC60_13795 CDS
T06519
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
yre
Yokenella regensburgei
Pathway
yre00300
Lysine biosynthesis
yre00470
D-Amino acid metabolism
yre01100
Metabolic pathways
yre01110
Biosynthesis of secondary metabolites
yre01120
Microbial metabolism in diverse environments
yre01230
Biosynthesis of amino acids
Module
yre_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HEC60_13795 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HEC60_13795 (lysA)
Enzymes [BR:
yre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HEC60_13795 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QIU90301
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All DBs
Position
complement(2851927..2853186)
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AA seq
419 aa
AA seq
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MPRPLNNTDTDLTADNLLRLPAEFGCPVWVYDAQIIRRQVAQLSRFDVVRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALVAGFDPRSNPDDIVFTADVIDEETIARVAELGIPVN
AGSVDMLGQLGTASPGHRVWLRINPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQR
HQLQLVGIHMHIGSGVDYGHLEQVCGAMVQQVIDFGQDLQAISAGGGLSIPYRQGEETID
TDHYYGLWNAAREQIARHFGHPVKLEIEPGRFLVAQAGVLVAQVRGVKEMGSRHFVLIDA
GFNDLMRPAMYGSYHHISALAADGRDLSQAPVLDTVVAGPLCESGDVFTQQEGGKVETRA
LPAVVAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDGGKARLIRRRQRIQDLLALEL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcccgctgaacaacactgataccgacctgaccgccgataacctgctgcgactt
cccgccgagtttggttgcccggtgtgggtgtatgacgcacagatcattcgccggcaggta
gcgcagctcagtcgttttgacgtggtccgttttgcccagaaggcctgttcgaacattcat
atcctgcgcctgatgcgtgaacagggcgtgaaggtggattccgtatcactcggcgaaatc
gaacgcgcgctggtggccggttttgacccgcgcagcaatccggacgacatcgtttttacc
gcggatgtgattgatgaagagaccattgcccgggtcgccgagctggggatcccggtgaat
gcggggtctgttgatatgctgggtcaattgggtactgcgtcaccaggtcatcgtgtctgg
ctgcggatcaatccggggtttggtcacgggcatagccagaaaaccaacaccgggggcgaa
aacagcaagcatgggatctggcatagcgatctgccggctgcgctggcggtgatgcagcgc
caccagcttcagctggttgggatccacatgcatattggatccggcgttgattatggtcac
cttgagcaggtgtgtggggcgatggttcagcaggtgattgattttggtcaggatctgcag
gcgatttccgccggtggcgggttgtcgattccgtatcgtcaaggtgaagagacaatcgat
accgaccactattacggtttatggaacgccgcccgtgagcaaattgcacgtcattttggt
catccggtgaagcttgaaatcgagccgggtcgtttcctggtggcacaggctggcgtgctg
gtggctcaggtgcgtggagtgaaggagatgggtagccgtcattttgtgctgattgatgcc
gggttcaacgacctgatgcgtccggcaatgtacggcagctatcatcacatctctgcactt
gccgccgatggtcgcgatctcagccaggcgccggtactggataccgttgtcgccgggccg
ctgtgcgaatctggtgatgtctttacccagcaggaaggtggcaaagtggaaactcgcgcg
ctgccggcggtagtggcgggagactatctggtactgcacgataccggagcctatggggcg
tcgatgtcatcgaactacaacagccgccccctgctgccagaagtgctgtttgacggcggt
aaagcacggctgatccgccgccgtcagcgcattcaggatctgctggcgcttgagctgtaa
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