Yokenella regensburgei: HEC60_13965
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Entry
HEC60_13965 CDS
T06519
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
yre
Yokenella regensburgei
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
yre03036
]
HEC60_13965 (xerD)
Chromosome and associated proteins [BR:
yre03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HEC60_13965 (xerD)
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
QIU90333
UniProt:
A0A6H0KA96
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All DBs
Position
complement(2889152..2890048)
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AA seq
298 aa
AA seq
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MEKDLAQIEQFLDALWLEKNLAENTLSAYRRDLTMLVEWLNHRGSTLETVQHDELQALLA
ERKAGGYKATSSARLLSAMRRFFQHLYREKLRADDPSAQLASPKLPQRLPKDLSEAQVDS
LLQAPLVDQPLELRDKAMLEVLYATGLRVTELVSLTMSDVSLRQGVVRVIGKGNKERLVP
LGEEAVYWLENYLEHGRPWLLNGISLDVLFPSSRAQQMTRQTFWHRIKHYAQLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaggatctcgcacaaatagaacagtttctcgatgcgctgtggcttgagaaaaat
ctggcggaaaacacgctcagcgcctatcgtcgggatctgaccatgctggtggagtggctg
aaccatcgcggatcaaccctcgaaaccgttcagcatgacgaactgcaggcgctgcttgct
gaacgtaaagccggtggctacaaagcaaccagttctgcccgtttgctgagcgccatgcgt
cgtttcttccagcatttgtatcgggaaaaactacgcgctgacgaccccagcgcccagctg
gcctcaccaaaactcccgcagcggttgcccaaagatctcagcgaggcgcaggtcgacagc
ctgttacaggcaccgttagttgaccagccgcttgagttacgcgataaagctatgctggaa
gtactctacgccaccgggctgcgcgtcaccgagctcgttagcctgaccatgagcgacgtg
agtttgcgacaaggggtggtgcgggttattggcaagggcaacaaagaacggctggttccg
ctgggagaagaagcggtgtactggctggagaattatcttgaacacgggcggccatggcta
ctgaacggcatttcgctggatgttctgttcccaagctcccgggctcagcaaatgacgcgc
cagaccttctggcatcgaattaagcactatgctcaactggcgggcatagacagtgaaaaa
ctctcgccgcacgttttacgacatgcgttcgcgacgcatttgctgaaccacggcgcagac
ctgcgcgtggtgcaaatgctgcttgggcatagcgatctgtcaacaacacagatctacacc
catgtcgcgaccgaacgcctgcggcagctccatcaacagcatcacccgcgtgcgtga
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