KEGG   Yokenella regensburgei: HEC60_16660
Entry
HEC60_16660       CDS       T06519                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
yre  Yokenella regensburgei
Brite
KEGG Orthology (KO) [BR:yre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:yre03021]
    HEC60_16660 (rpoH)
Transcription machinery [BR:yre03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HEC60_16660 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 KORA HTH_10 SANT_DAMP1_like UCR_14kD WASH_WAHD HTH_3 HTH_25
Other DBs
NCBI-ProteinID: QIU90830
LinkDB
Position
complement(3432128..3432982)
AA seq 284 aa
MTKEMQTLALAPVGNLESYIRAANAWPMLSADEERALAEKLHYQGDLEAAKTLILSHLRF
VVHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVDMVARELGVTSKDVLEMESRMAAQDM
TFDMSSDDESDSQPMAPVLYLQDKSSNFADSIEDDNWEEQAANKLTDAMQGLDERSQDII
RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq 855 nt   +upstreamnt  +downstreamnt
atgaccaaagaaatgcaaactttagctttagcccccgttggtaatctggaatcttatatc
cgggctgcaaacgcatggccgatgttgtcggctgatgaagagcgggcgcttgctgaaaag
ctgcattaccagggcgatctggaagcagctaagacgctgatcctgtctcacctgcgcttt
gttgttcacgttgctcgtaattactcgggctacggcctgccgcaggcggacctgatccag
gaaggtaacatcggtctgatgaaggccgtccgtcgattcaatccggaagtgggtgtccgt
ctggtttccttcgcggtgcactggatcaaagctgaaattcacgagtacgtgctgcgcaac
tggcgcatcgtgaaagtcgcgaccaccaaggcacagcgtaagctgttctttaatttgcgt
aaaaccaagcagcgtctgggctggtttaaccaggatgaagtcgatatggtggcacgtgag
ctgggcgttaccagcaaagatgtgctcgagatggagtcgcgcatggcggcgcaggacatg
acctttgatatgtcctcggacgacgagtccgacagccagccgatggcgccggtgctctat
ctgcaggataaatcgtctaactttgccgacagcattgaagatgataactgggaagagcag
gcggcgaataagctgaccgacgcgatgcagggcctggacgagcgtagccaggacatcatc
cgcgcccgctggctggacgaagacaacaagtccacgctgcaggagctggccgaccgctac
ggcgtttccgctgaacgtgtacgtcagctggaaaagaacgcgatgaaaaaactgcgcgcc
gctatcgaagcgtaa

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