Yokenella regensburgei: HEC60_17410
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Entry
HEC60_17410 CDS
T06519
Symbol
waaA
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
yre
Yokenella regensburgei
Pathway
yre00540
Lipopolysaccharide biosynthesis
yre01100
Metabolic pathways
Module
yre_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HEC60_17410 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yre01005
]
HEC60_17410 (waaA)
Enzymes [BR:
yre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
HEC60_17410 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
HEC60_17410 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
HEC60_17410 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
HEC60_17410 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
yre01005
]
Lipid A
HEC60_17410 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
QIU90968
LinkDB
All DBs
Position
3604880..3606154
Genome browser
AA seq
424 aa
AA seq
DB search
MELLYTALLYLIQPLVWLRLLLRSRKAPAYRKRWAERYGFCKNKVAPEGILLHSVSVGET
LAAIPLVRALRHRYPTLPITVTTMTPTGSERAMSAFGKDVHHVYLPYDLPCAMNRFLDTV
RPKLVIVMETELWPNMVSALHARKIPLVIANARLSERSAKGYGKLGGFMRRLLAKITLIA
AQNEEDGNRFLALGLKRNQLAITGSLKFDISVTPELAARAVTLRRQWAARRQVWIATSTH
DGEEQIILEAHKTLLKTFPDLLLILVPRHPERFPDARQMVQKAGLSFTLRSTGEIPSGST
QVVIGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEPAAHAIPVLMGPHTFNFKDICAR
LQQADGLITVTDADSLVKEISNLLTDEDYRLWYGRHAVEVLHQNQGALTRLLQLLQPYLP
QRSH
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
ttggaattgctttataccgccttactctacctgattcagccgctggtctggcttcgcctg
ctgcttcgcagccgcaaggcccccgcttacagaaaacgctgggcagaacgctacggcttt
tgcaaaaacaaggtagccccggagggtatactcctgcattccgtgtcggtgggtgaaacg
ctggcggctatcccgctggttcgcgcactgcgccaccgctatccgacgttgccgattacc
gtcaccaccatgacaccgaccggctccgagcgcgccatgtccgcgttcggcaaagatgtt
caccacgtctatttgccttacgatctgccctgcgccatgaatcgtttccttgataccgtg
cgtcctaagctggtcatcgtgatggaaaccgaactgtggccgaacatggtttccgcgtta
catgcgcgcaaaattcccctggttatcgccaacgcgcgtctttcagagcgttcagcgaag
ggttacggcaagttgggcggctttatgcgtcgcctgctggcaaaaataaccctgatcgcc
gcgcagaatgaagaggacggcaaccgcttcctcgccctcggactgaagcgtaaccagttg
gctatcaccggcagcctgaagtttgatatttccgtgacgcctgagctggcggctcgcgcc
gtcactctgcgccgtcagtgggccgcgcgccgtcaggtatggattgcgaccagtacccac
gatggcgaagagcagataatcctcgaagcgcataaaacgctgctgaagaccttcccagat
ctgctgctgattctggtaccccgtcaccctgaacgcttccctgatgcccgccagatggtg
caaaaagcaggcctgagctttaccctgcgcagcactggcgaaatcccgtcaggcagcact
caggtggtgattggcgataccatgggcgaactgatgctgctgtacggcattgccgatctc
gcttttgtgggcggcagcctggtcgagcgcggtgggcataaccctctggagcctgcagct
catgccattccggtcctcatgggcccgcacacctttaactttaaagatatctgcgcgcgc
ctgcagcaggcggacgggcttatcaccgtaaccgatgccgattcgctggtgaaagagatt
tctaatctgctcaccgatgaagactatcgcctgtggtatgggcgccatgcggtggaagta
ctgcatcagaaccagggcgcactgacccgtctgcttcagcttctgcaaccctatttgccc
cagcggagccactaa
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