Yokenella regensburgei: HEC60_18390
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Entry
HEC60_18390 CDS
T06519
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
yre
Yokenella regensburgei
Pathway
yre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HEC60_18390 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yre03400
]
HEC60_18390 (priA)
Enzymes [BR:
yre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEC60_18390 (priA)
DNA repair and recombination proteins [BR:
yre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HEC60_18390 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
WHD_PriA
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
Zn_ribbon_5
CEP104_ZnF
IBR_1
Motif
Other DBs
NCBI-ProteinID:
QIU91151
LinkDB
All DBs
Position
complement(3805754..3807949)
Genome browser
AA seq
731 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPDSMSAKAGCRVRVPFGKQERVGIVVSVSEQSELPLAELK
SVVEVLDGEPVYSHSVWRLLLWAAEYYHHPVGDVLFHALPIPLRQGKPASAAPLWYWFAT
EEGQVVDINSLKRSAKQQRALAALRTGKIWRHQVAELELDEAGFQALRKKGLSELGSEAP
AMTDWRDGYAVAGERLRLNTEQATAVGAIHSESDRFSAWLLAGVTGSGKTEVYLSVLENV
LAKGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI
GTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL
ETLHNVRQGKYRQLRLTQRAGNARPANQHVLDMKGQQLQAGLSPALISRMRQHLQADNQV
ILFLNRRGFAPALLCHDCGWIAECPRCDSYYTLHQAQQHLRCHHCDSQRPVPRQCPSCGS
THLVPVGLGTEQLEQALAPLFPGVPVSRIDRDTTSRKGALEQYLAEVHRGGARILIGTQM
LAKGHHFPDVTLVSLLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVILQTHHP
EHPLLQTLLHQGYDAFAQQALAERQTMQLPPWTSHVLIRAEDHNNQQAPQFLQQLRNLIQ
ASPLADDKLWVLGPVPALAPKRGGRWRWQILLQHPSRIRLQHIVSGTLVLINTLPESRKV
KWVLDVDPIEG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgctcacgttgccctgcccgttccgctgccccgcacctttgattatctgctg
cccgacagcatgagcgccaaagccgggtgtcgtgtgcgtgtgccgtttggtaagcaggag
cgcgtgggcattgtggtttcggtaagcgaacagagcgagctgccgctggcggagcttaaa
agcgttgttgaagtgctggacggcgagccggtttattcgcactcggtctggcggctgcta
ctgtgggcggcagaatattaccaccacccggtgggtgacgtgctgtttcacgccctgccc
attcctctgcgtcagggcaaaccggccagcgccgcaccgctgtggtactggtttgccacg
gaagagggccaggtcgtcgatatcaactcgctgaagcgttcggcaaaacagcagcgcgcg
ctggcagccttacgcaccggaaaaatctggcgtcaccaggtggctgagcttgagctcgac
gaagcgggattccaggcgctgcgtaaaaaaggcctgagtgaactgggctctgaagcaccg
gcgatgaccgactggcgcgacggctacgcggtggccggtgaacgtctgcggctcaatacc
gagcaggccaccgccgtgggcgctattcatagcgaatctgatcggttttccgcctggctg
ctggccggggtgaccggctccggcaaaaccgaagtctatctgagcgtactggaaaacgtg
ctggcaaagggcaaacaggcgctggtgatggtgccggaaatcggcctgaccccgcaaacc
atcgcccgttttcgtgaacgttttaacgcgcccgttgaggttctgcactccgggcttaac
gacagcgaacggctttcggcgtggctgaaggccaaaaacggcgaggcggcaattgtcatc
ggcacccgctcgtcgttgtttaccccgttcaaaaacctcggcgtgatcgtcatcgacgaa
gagcacgacagctcctacaagcagcaggaaggctggcgctatcacgcccgcgacctggct
gtataccgggcgcacagcgagcaaatccctatcatcctcggctccgctaccccggcgctg
gaaacgctgcacaacgtccgtcagggcaagtatcgccagctgcgcttaacccagcgtgcc
ggtaacgcgcgtccggcaaatcagcacgtgctggatatgaaaggccagcagctgcaggcg
gggctctctcctgcgctgataagccgtatgcgccagcacctgcaggcggataaccaggtg
attttgttcctgaaccgtcgcggattcgccccggcgctgctgtgccacgactgcggctgg
attgccgaatgtccgcgctgcgacagctattacacgctgcaccaggcgcagcagcatctg
cgctgccaccattgtgacagccaacgaccggttcctcgccagtgtccctcatgcggttcc
acgcacctggtgccggtagggctgggcacggaacagctggagcaggcgctggcgccgctg
ttcccgggggtaccggtctcccgcatcgaccgcgataccaccagccgtaagggcgcgctg
gagcagtatctggcggaagtacatcgcggcggtgcgcgtatcctgattggcacccagatg
ctggcaaaagggcaccattttcccgacgtcacgctggtgtcactgctcgacgttgacggc
gcgctgttctccgccgatttccgttccgccgagcgtttcgcccagctttatactcaggtt
tcggggcgtgccggacgcgctggcaagcagggggaagttatcctgcaaacgcaccacccg
gaacacccgctgctacaaaccctgctccaccagggctacgacgcttttgctcaacaggcg
ctggcagaacgacagaccatgcagcttccgccgtggaccagccacgtgcttatccgcgcc
gaagatcacaacaatcagcaggcaccgcagtttcttcagcaactgcgtaacctgatccag
gcaagcccgctggcggacgacaagctgtgggtactaggcccggttccggcgctggcgcca
aaacgcgggggccgctggcgctggcaaattttactgcagcatccgtcacgcattcgtctg
cagcacatcgttagcggaaccctggtgctcatcaatacgctgccggaatcccgcaaggta
aaatgggtgctggacgttgaccccattgaaggctaa
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