Yokenella regensburgei: HEC60_18660
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Entry
HEC60_18660 CDS
T06519
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
yre
Yokenella regensburgei
Pathway
yre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEC60_18660 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yre03019
]
HEC60_18660 (rhlB)
Enzymes [BR:
yre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HEC60_18660 (rhlB)
Messenger RNA biogenesis [BR:
yre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HEC60_18660 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CCDC138_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QIU91194
LinkDB
All DBs
Position
complement(3871458..3872726)
Genome browser
AA seq
422 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIENRQVNQPRALIMAPTRELAVQIHADAEPLAKATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYTKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPATQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPRALRLTRSRPGNGPRRSGGAPRNRRR
SG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccgaaagtt
gtagaagcccttgaaaagaaagggtttcataactgtacgcccattcaggcactcgccctc
ccgctgacgctggcgggtcgggacgttgccgggcaggcgcaaaccggtaccgggaaaacg
atggcgttcctgacgtcaacgtttcattatcttctttctcacccggccattgaaaaccgc
caggtgaaccaaccgcgcgcgctgatcatggcgccgacccgcgagttggcggtgcagatt
catgccgatgctgagcctctggctaaagcaacgggcctgaagctgggcttagcttacggc
ggtgatggctacgacaaacagcttaaagtgctggaaagcggcgtcgacatccttatcggc
accacgggccgtttaatcgattacaccaagcagaaccacatcaaccttggcgctattcag
gtggttgtgctcgacgaagcggatcgcatgtacgatctcggcttcattaaagatatccgc
tggctgttccgccgtatgccgcctgcgactcagcgtctcaacatgctgttctccgcgacc
ctctcttatcgcgtccgcgaactggcgttcgagcagatgaacaacgccgaatacgtcgaa
gtggaaccggagcaaaaaaccggccaccgcattaaagaagagctgttctatccttccaac
gaagagaagatgcgtttactgcaaacgctgctggaagaagagtggccagaccgcgcaatt
atcttcgccaacaccaaacaccgttgcgaagatatctggggccatctggcggccgacgga
caccgtgtgggcctgctgaccggcgacgtcgcacagaaaaaacgcctgcggatcctcgaa
gagttcacccgtggcgatctcgatattctggtagcgacagacgttgcggcccgtggcctg
catatcccggctgtgacgcacgtatttaactacgatctgccagacgactgcgaagactac
gttcaccgcattggccgtaccggccgcgcaggtgcaagcggtcactctatcagcctcgcc
tgtgaagagtacgcgttgaacctcccggcgattgaaacctatatcggccactccatcccg
gtcagtaaatacaacccggatgcgctgatgaccgatctgccaagggcactgcgtctgacg
cgctcccgcccgggcaatgggccgcgccgctccggtggtgctccacgtaatcgtcgtcgc
tcaggttaa
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