Yokenella regensburgei: HEC60_18955
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Entry
HEC60_18955 CDS
T06519
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
yre
Yokenella regensburgei
Pathway
yre00071
Fatty acid degradation
yre00280
Valine, leucine and isoleucine degradation
yre00310
Lysine degradation
yre00362
Benzoate degradation
yre00380
Tryptophan metabolism
yre00410
beta-Alanine metabolism
yre00640
Propanoate metabolism
yre00650
Butanoate metabolism
yre00907
Pinene, camphor and geraniol degradation
yre00930
Caprolactam degradation
yre01100
Metabolic pathways
yre01110
Biosynthesis of secondary metabolites
yre01120
Microbial metabolism in diverse environments
yre01200
Carbon metabolism
yre01212
Fatty acid metabolism
Module
yre_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HEC60_18955 (fadB)
00650 Butanoate metabolism
HEC60_18955 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HEC60_18955 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HEC60_18955 (fadB)
00310 Lysine degradation
HEC60_18955 (fadB)
00380 Tryptophan metabolism
HEC60_18955 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HEC60_18955 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HEC60_18955 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HEC60_18955 (fadB)
00930 Caprolactam degradation
HEC60_18955 (fadB)
Enzymes [BR:
yre01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HEC60_18955 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HEC60_18955 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HEC60_18955 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HEC60_18955 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QIU91246
LinkDB
All DBs
Position
complement(3928788..3930977)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGSALDVLEKQHDLKGLLLRSE
KAAFIVGADITEFLSLFLVPQEQLSQWLHFANSVFNRLEDLPVPTISAINGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRLLGADSALEIIAAGKDVGAEQALK
IGLVDGVVKTEKLRDGALTILRQAINGDLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMV
AQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLENQSFVPLAHTPEARALVGIFLNDQYVK
GQAKHLTKNIETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLTLGMTEAAKLL
NKQLERGKIDGLKLAGVISTIHPTLDYSGFERVDVVVEAVVENPKVKKAVLAETEDKVRP
DAVLASNTSTIPISELASVLKRPENFCGMHFFNPVHRMPLVEVIRGEKTADSTIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDASRYGQKNGLGFWRYTADSKGKP
KKEEDPAVDSLLADVSKAKRDFSDEEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYEHLGPLYQVPEGLRTKARHNEAYYPPVEPA
RPVGELKKA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctacaaaggcgacaccctgtacctcgactggctggaagatggcattgccgaactg
gtattcgatgcccccggctcggtcaacaagctcgataccgcaaccgtagcaagcctcggc
agcgcgctggacgtgctcgaaaaacaacatgacttaaaaggtctgctgctgcgctctgag
aaagcggcgtttatcgtcggcgcggatatcaccgaattcctgtcgctgttcctggtccct
caggagcagctgagccaatggctgcattttgccaacagcgtatttaaccgtcttgaagac
ttaccggtaccgaccatctccgccatcaacggctatgcgctgggtgggggctgcgaatgt
gtactggccaccgactaccgtctggcaacgccggatctgcgtattggcctgccggaaacc
aaactgggcatcatgcctggcttcgggggctctgttcgcatgccgcgcctgctgggtgcc
gacagcgcactggaaatcatcgcagccggaaaagacgttggtgctgaacaggcgctgaag
attggtctcgtcgatggcgtggtcaaaaccgagaaactgcgcgatggtgcccttactatt
ctgcgtcaggccattaacggcgatctcgactggaaagcgaaacgtcagccgaagcttgag
ccgctgaagcttagcaaaattgaagctgccatgagcttcaccatcgccaaaggcatggtg
gcgcaaaccgccggaaaacattacccggcgccgatgaccgcagtgaaaacgattgaagcg
gctgcaaaactggggcgtgatgaagcactgaagctggaaaaccagagcttcgttcctctg
gcccatactcctgaagcccgtgcgctggtcggtattttcctcaacgaccaatatgttaag
ggtcaggcaaagcatctgaccaaaaatatcgaaaccccgaaacaggcagccgtcctcggc
gccgggatcatgggtggcggtattgcttaccagtccgcctggaaaggcgtaccggtgatt
atgaaggatatcaatgacaaatcgctgaccctcggtatgaccgaagccgccaaactgctg
aataaacagctggaacgcggaaaaatcgacggtctgaaactggcgggcgttatctctact
attcatccaaccctcgactactctggttttgagcgtgtcgatgtggtggttgaagccgta
gtagaaaacccgaaagtgaaaaaagccgttcttgcagaaaccgaagacaaagtacgccct
gacgcggtgctggcttccaacacctcgaccattccgattagcgaactagcaagcgtgctg
aagcgtccggaaaacttctgcggcatgcacttcttcaacccggtacaccgtatgccgttg
gtggaagtcatccgcggcgagaaaaccgccgacagcaccattgctaaagtggtggcgtgg
gcgagcaaaatgggcaaaacccctatcgtggtcaatgattgcccaggcttcttcgtcaac
cgtgtactgttcccttacttcgctggtttcagccagttgctgcgcgacggggctgatttc
cgcaaagtcgacaaagtgatggagaaacaattcggctggccgatgggtccggcttatctc
ctcgacgtggtcggtatcgacacggcgcaccatgcacaggccgtgatggccgcgggcttc
ccgcagcgcatgcagaaagattaccgcgacgccattgatgcgctgtttgacgccagccgc
tacgggcagaaaaacggcctcggcttctggcgctacaccgcagatagcaaaggcaagccg
aagaaagaagaagatccggcggtggatagcctgctggctgacgtgagcaaagcaaaacgc
gacttcagcgacgaggaaatcatcgcccggatgatgatcccgatggtcaacgaagttgtc
cgttgcctcgaggaaggcattatcgcaagccctgcggaagcggatatggcgctggtgtat
ggcttaggcttccctccgttccacggcggcgcattccgctggctggacacgctcggcagc
gcgaaatatctcgatatggcgcagcagtatgagcacctgggcccgttgtatcaggttccg
gaaggtctgcgtaccaaagcgcgtcataacgaagcgtactatcccccggttgaacctgcc
cgcccggtgggtgagctgaaaaaggcttaa
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