Yokenella regensburgei: HEC60_21170
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Entry
HEC60_21170 CDS
T06519
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
yre
Yokenella regensburgei
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yre03400
]
HEC60_21170 (radA)
DNA repair and recombination proteins [BR:
yre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HEC60_21170 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
RecA
AAA_22
GvpD_P-loop
Rad51
SLFN-g3_helicase
AAA_16
AAA_14
ABC_tran
AAA
NTPase_1
AAA_24
nSTAND3
DUF7125
DZR
cobW
AAA_29
Zeta_toxin
Zn_ribbon_Thio2
AAA_30
Viral_helicase1
PAXNEB
DUF7767
Motif
Other DBs
NCBI-ProteinID:
QIU91640
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All DBs
Position
4387960..4389342
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AA seq
460 aa
AA seq
DB search
MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEMRIAASPTVARNERLSGYAGNAGG
SKVQKLSDISLEDLPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCRLA
EQMKTLYVTGEESLQQVAMRAHRLGLPTANLNMLSETSIEQICQIAEEEQPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDQSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPAANVPKKVPEGMQVFPVKKLTDALSVFDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagcacctaaacgcgcctttgtatgtaatgaatgcggcgcggattatccgcgc
tggcaggggcagtgtagtgcctgtcacgcctggaacaccatcaccgaaatgcgcattgcc
gcatcgccaacggtggcgcgcaacgaaaggctgagcggctatgcggggaacgcaggcggc
tcaaaagtgcagaagctctctgacatcagcctcgaagatctgccgcgtttttccaccggg
tttaaagagttcgaccgtgtgctgggcggcggcgttgtgcccggcagcgccattcttatc
ggcggtaacccgggagccgggaaatcgacactgcttctgcagacgctgtgccgactggcc
gagcagatgaaaacgctgtacgtcaccggtgaagagtcgctgcaacaggttgcgatgcgt
gcgcaccgcctcgggctgccgacggcaaaccttaatatgctgtcggaaaccagcatcgaa
caaatctgccagattgccgaagaagagcaacctaagctgatggttatcgactccatccag
gtgatgcatatggcggatattcagtcttcaccgggcagcgttgcccaggtgcgtgaaact
gcggcctatctgacgcgctttgcgaagacccgtggggttgccatcgtgatggtgggacac
gtaaccaaagacggttctctggctgggccgaaggtgcttgagcactgtatcgactgctcg
gtgctgctcgatggcgatgccgattcccgcttccgtacgctgcgtagccataaaaaccgt
tttggagcggtgaatgaacttggcgtatttgccatgacggaacaggggctgcgcgaagtc
agcaacccgtcggcgattttccttagccgcggcgatgaggtcacctccggtagctcagtg
atggtggtctgggaaggtacgcgaccgctgctggtagagattcaggcgctggtcgaccaa
tcaatgatggcgaatcctcgccgcgtcgcggtggggcttgagcaaaaccgactggccatc
ctgcttgccgtgttgcaccgccacggcgggttgcagatggcggatcaggatgtgttcgtc
aacgtggtcggtggggtgaaggtgacagaaaccagcgctgacctggcgctgctgctggcg
atggtttcgagcctgcgtgaccgcccgctgccgcaggatctggtggtctttggcgaagtg
gggctggcaggggagatccgcccggtgcccagcggtcaggagcgtatctctgaggcggcg
aaacatggtttccgccgggcgattgttcccgcagcaaacgtaccgaaaaaagtcccggaa
ggcatgcaggtgtttccggtgaagaaactgacggatgcgctaagtgtctttgacgactta
taa
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