Yokenella regensburgei: HEC60_21415
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Entry
HEC60_21415 CDS
T06519
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
yre
Yokenella regensburgei
Pathway
yre00220
Arginine biosynthesis
yre00240
Pyrimidine metabolism
yre00250
Alanine, aspartate and glutamate metabolism
yre01100
Metabolic pathways
yre01110
Biosynthesis of secondary metabolites
yre01240
Biosynthesis of cofactors
Module
yre_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HEC60_21415 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HEC60_21415 (carB)
00220 Arginine biosynthesis
HEC60_21415 (carB)
Enzymes [BR:
yre01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HEC60_21415 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
ATP-grasp_5
Radical_SAM
BamE
Motif
Other DBs
NCBI-ProteinID:
QIU91688
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Position
4440349..4443573
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AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA
DAIDKAEDRRRFDVAMKKIGLDTARSGIAHTMEEALAVAADVGYPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESMQKALRGLEVGATGFDPKVSLEDPEA
LTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEQVAEIG
ITGLDADFLRTLKRKGFADARLAKLAGVREAEIRKLRDQYNLHPVYKRVDTCAAEFATDT
AYMYSTYEDECEANPSVDRDKVMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVP
VIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEIGYPLVVRPSYVL
GGRAMEIVYDEADLKRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGEMVLIGGIME
HIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMVGQTLSQQGVTKEIIPPYYSVKEVVLPFNKF
PGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKRNGRALLSVREGDKARVVDL
AAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNADATEKVTSVQEMHAKISK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatattaaaagcatcctgatcctcggcgctggcccgattgttatc
ggccaggcctgcgaattcgactactccggcgctcaggcgtgtaaagccctgcgcgaagag
ggttaccgcgttgttctggtgaactccaacccggcaaccatcatgactgacccggaaatg
gctgatgcgacctacattgagccgattcactgggaagtcgtgcgtaagattattgaaaaa
gagcgtccggatgcggtcctgccgaccatgggcggccagacggcgctgaactgtgcgctc
gaactggagcgtcagggtgtgctggctgagtttggcgtcaccatgattggcgccactgcg
gatgccatcgataaagccgaagaccgccgccgtttcgacgtggcgatgaagaaaattggc
ctcgacactgcacgctctggcatcgctcatacgatggaagaggccctggcggttgcggct
gatgtcggttatccgtgcattatccgcccatccttcaccatgggtggcaccggtggcggt
attgcctataaccgcgaagagttcgaagagatttgcgaacgcggtctggatctctctccc
accaacgagctgctgattgatgagtcgctgatcggctggaaagagtacgagatggaagtg
gtgcgtgataagaacgacaactgcatcattgtctgctccatcgaaaacttcgacgccatg
ggcattcacaccggtgactccatcaccgttgcaccagcgcagaccctgaccgataaagaa
taccaaatcatgcgtaacgcctcgatggcggtgctgcgtgagatcggtgtggaaaccggc
ggctctaacgttcagttcgcggtaaacccgaaaaacggtcgactgattgttatcgaaatg
aacccgcgcgtgtcccgctcttcggcgctggcctcgaaagcaaccggcttcccgattgct
aaagtcgccgccaagctggcggtggggtacacccttgacgagctgatgaacgacatcacc
ggcggccgcactccggcttccttcgaaccgtctatcgactacgtcgtgactaaaatccca
cgcttcaacttcgaaaaatttgccggtgctaacgaccgtctgaccacccagatgaaatcg
gttggtgaagtgatggccattggccgcacccagcaggaatccatgcagaaagcgctgcgt
ggcctcgaagtcggtgctaccggtttcgacccgaaagtgagccttgaagacccggaagcg
ctgaccaaaatccgccgcgaactgaaagacgctggcgccgagcgtatctggtatatcgcc
gatgcgttccgtgcgggcctgtccgtcgatggcgtatttaacctgaccaacatcgaccgc
tggttcctggtacagattgaagagctggtgcgcctggaagagcaggtggctgaaatcggt
atcaccggcctcgacgccgatttcctgcgcacgcttaagcgtaaaggcttcgccgatgcg
cgtctggcaaaactggcaggggttcgcgaagcagaaatccgcaaactgcgcgatcagtac
aacctgcacccggtctataagcgcgtggatacctgtgcggctgaatttgctaccgacacc
gcctacatgtactccacttatgaagatgagtgtgaagcgaacccgtccgttgaccgcgat
aaagtgatggtcctcggcggcggcccgaaccgtatcggtcagggcattgagttcgactac
tgctgcgttcacgcctcgctggcgctgcgtgaagacggttacgagaccattatggtcaac
tgtaacccggaaaccgtttctaccgactacgacacctccgaccgcctgtactttgagccg
gtaacgctggaagacgtgctggaaatcgtgcgtatcgagaagccgaagggcgttatcgtg
cagtacggtggtcagactccgctgaagctggcgcgtgcgcttgaagcggccggtgtaccg
gttatcggtaccagcccggacgccattgaccgtgccgaagaccgtgagcgcttccagcat
gcggttgaccgtctgaagctgaagcagccagcaaacgccactgtgaccgctatcgaacag
gccgttgagaaggcaaaagagattggctacccgctggtagtgcgcccgtcctacgttctg
ggtggccgcgcgatggaaatcgtctatgacgaagccgaccttaagcgctatttccagact
gcagtcagcgtttctaacgatgcgccagtgctgctcgaccgcttcctcgacgatgcggtg
gaagtggacgtggatgccatctgtgacggcgaaatggtgctgattggtggcattatggag
cacatcgagcaggcaggcgttcactccggtgactccgcttgttctctgccagcctatacg
ctgagccaggaaattcaggatgtgatgcgccagcaggtgcagaaactggccttcgaactg
caggttcgtggtctgatgaacgttcagttcgcggtgaaagacaacgaagtttacctgatt
gaagtgaacccgcgtgctgcacgtaccgtcccgtttgtctctaaagcgaccggcgtaccg
cttgcaaaagtggccgcgcgcgtgatggtcggccagacgctgagccagcagggtgttacc
aaagaaattatcccgccgtactactcggtgaaagaagtggtgctgccgttcaacaaattc
ccgggcgttgacccgctgttagggccagaaatgcgctctaccggggaagtgatgggcgtc
ggccgcaccttcgcggaagcgttcgccaaagcgcagctcggcagtaactctacgatgaag
cgtaatggtcgtgcgttgctgtcggtacgtgaaggcgataaggcacgtgtggtggattta
gccgccaagctgctgaaacagggcttcgagctggatgccacccacggtaccgcgattgtg
ctgggcgaagccggtatcaacccgcgcctggtgaacaaggtgcatgaaggccgtccgcac
attcaggaccgcattaagaatggcgagtacacctacatcatcaacaccaccgcaggtcgc
caggcgattgaagactccaagctgattcgccgcagcgcgctgcagtacaaagtgcactac
gacaccaccctgaacggcggtttcgcaacagccatggcgctgaatgcggatgcgactgag
aaggtgacctcggtgcaggagatgcacgcgaagattagcaaataa
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