Yokenella regensburgei: HEC60_23385
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Entry
HEC60_23385 CDS
T06519
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
yre
Yokenella regensburgei
Pathway
yre03030
DNA replication
yre03430
Mismatch repair
yre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEC60_23385 (dnaX)
03430 Mismatch repair
HEC60_23385 (dnaX)
03440 Homologous recombination
HEC60_23385 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yre03032
]
HEC60_23385 (dnaX)
03400 DNA repair and recombination proteins [BR:
yre03400
]
HEC60_23385 (dnaX)
Enzymes [BR:
yre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEC60_23385 (dnaX)
DNA replication proteins [BR:
yre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEC60_23385 (dnaX)
DNA repair and recombination proteins [BR:
yre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEC60_23385 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_16
AAA_assoc_2
ResIII
AAA_2
AAA_14
PIF1
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QIU92062
LinkDB
All DBs
Position
4854783..4856714
Genome browser
AA seq
643 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCESGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPSHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRHQLEHILAEEHIESEPRALQLLARAADGSLRDALSLTDQAIASGEGQLTTEAVSQM
LGTLDDSQALSIVEALVAADGERVMNLVNDAAQRGVEWEALLVEMQSLLHRVAMVQLSPS
ALGTDMAAVEQRMRELARTVPPTDVQLYYQTMLVGRKELPYAPDRRMGIEMTLLRALAFH
PRQPLPEPEVQAQSFAPVAPTAVLNPNQVPAQSPAAPAYQNESLPDSTSQVLAARNQLQR
TQGATKAKKSEPAAASRARPVNNAALERLASVTERVQARPAPAALEQQKAVKKEAYRWKA
TTIVETVKEEVATPKALKKALEHEKTPELAAKLAAEAIERDAWAAEVSQLQLPKLVEQVA
LNAWKEQTGNQVCLHLRPTQRHLNSAGAQKALAEAMSTLQGAPVELTITEDDNPTHRTPL
EWRQAIYEEKLAQAREAMIADSNIQTLRRFFDADLDEESIRPI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtcttagcccgaaaatggcgaccacaaacctttgctgacgttgtcggc
caggaacatgtgctgaccgccctggcgaatggcttatcgttagggcgtattcatcacgcg
tatctcttctccggcacccgtggcgtcggtaagacctctattgcccgcttgctggcgaag
gggcttaactgcgaatccgggatcaccgcgacgccgtgcggcgtgtgcgataactgccgt
gaaatcgagcaggggcgctttgtcgatctgattgagatcgatgcggcgtcgcggaccaaa
gttgaagatacccgcgatctgctggataacgtccagtacgccccggcgcgcggccgcttt
aaagtctatctgatcgatgaagtgcacatgctctcgcgtcacagctttaacgcgctgttg
aaaacgctggaagagccgccatcgcacgtcaaattcctgctggcgaccaccgatccgcaa
aagctgccggtgaccattctctcccgttgcctgcagttccatctgaaggcgctggacgta
gagcagatccgtcaccagctcgagcatattctcgccgaagagcatatcgagtctgaacca
cgggcgttacagctgctggcgcgcgccgccgacggcagcctgcgtgatgcgctgagcctc
accgatcaggcgattgccagcggggaaggccagctgaccaccgaagccgtgagccagatg
ctcggcaccctcgacgactcacaggcgctgtcgattgttgaggcgctggtcgccgccgac
ggcgagcgcgtgatgaacctcgttaacgatgccgcccagcgcggcgttgagtgggaggcg
ctgctggtagaaatgcaaagcctgctgcaccgtgtcgcaatggtccagctgtcgccatcg
gcgctgggtacagatatggcagccgttgagcagcggatgcgcgaactggcgcgaaccgta
ccgcccacggatgttcagctctactatcagaccatgctggtagggcgcaaagagttgccc
tatgcgccagacaggcggatgggtattgaaatgacgctgctgcgcgcgctggcattccac
ccgcgccagccgctgccagagccggaggttcaggcgcagtcttttgcgcccgtcgcgcca
acggcggtgctgaaccctaatcaggttcccgcacaaagcccggcggccccggcatatcag
aacgaatcgctaccggactccacgagtcaggtgctggcagcccgtaaccagctgcaacgc
acccagggagcgaccaaagcaaaaaagagtgaaccggcagccgcttcccgcgcgcggccg
gtgaataacgctgcgctggaaagactggcatccgtgacggagcgcgttcaggcgcgcccg
gctcctgccgcgcttgagcagcagaaagcggtgaagaaagaggcgtaccgctggaaggcc
accacgattgtcgaaaccgtgaaagaagaggtggccacgccgaaggcgctgaaaaaagcg
ctggagcacgagaaaacgccagagctggcggctaagcttgcggcagaggccatcgaacgc
gatgcctgggcggcagaggtcagccagctccagctaccgaaattggttgagcaggtggcg
ctcaacgcgtggaaagagcagaccggcaatcaggtttgtctgcacttacggccaacgcaa
cgtcacctgaactcggccggtgcgcaaaaagcgctggctgaggcaatgtcgacgctacag
ggtgcgcccgttgaattaaccatcacagaagatgataatccaactcaccgcacgccgctg
gagtggcgacaggccatttacgaagaaaagctcgcgcaggcgcgcgaggccatgattgcg
gatagcaacattcagacgctgcgtcgattcttcgatgcggacctggatgaagagagtatt
cgccccatttga
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