Yoonia rhodophyticola: AABB31_02355
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Entry
AABB31_02355 CDS
T10513
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yrh Yoonia rhodophyticola
Pathway
yrh03420
Nucleotide excision repair
yrh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AABB31_02355
03430 Mismatch repair
AABB31_02355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yrh03400
]
AABB31_02355
Enzymes [BR:
yrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AABB31_02355
DNA repair and recombination proteins [BR:
yrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AABB31_02355
MMR (mismatch excision repair)
Other MMR factors
AABB31_02355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
AAA_11
UvrD_C
ResIII
AAA_16
DUF4110
Motif
Other DBs
NCBI-ProteinID:
WZU67823
UniProt:
A0AAN0MDR0
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All DBs
Position
3038350..3040227
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AA seq
625 aa
AA seq
DB search
MTAASSDNSHDALADETIRECLALDSPKSFFLYAGAGSGKTRSLVTAIRDLLEKQGRQLV
LTGRKVAIITYTNAACDEIKQRLEFDPRIDVSTIHSFAWSLIRGYDDDIRRWIDARLLED
IAELEEKQKKGRAGKATIERAQSIESKTRRRAMLGDIQRFIYSPTSDNRTRDALNHAEVI
AMTADFLSQKPGLRRQLVTRYPVLLIDESQDTTKRLMDAFLLVQEAFAEQFCLGLLGDTM
QRIYADGKVGLAEAIPSTWAFPRKVMNHRCPKRVVTLINKIRADDDAQEQKARSDASEGF
VRLFLISEGVADKNVIEAKAAAQMAQLTGDQAWAGEHADVKTLALEHMMSARRFGFERFF
EPLYGYEPIRTGLLDGSGRGIGFFTRELLPLAHALMSKDHFGVASATRRSSPLLDRSFLA
EAGKDQKEALKAAKLACDGLYELLVDETPPTLRTILRHVAQTKLFEIPDVLKPFVPENDE
VIEEGEDDAKSELGAWRMALDAPFQEIQKYDRYVRGVSQFDTHQGVKGLEFPRVMVIISD
AEARGFLFSYGKLMGTKEKSKADLDNEVAGKDTSIDRTRRLFYVTCSRAEESLAVVYYSD
DPTAARAAILEQGWFGEQEIEIMTA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggcatcttcagacaatagccacgacgctttggcggatgagactattcgagaa
tgccttgcgttggatagtccaaagagctttttcctttatgctggggcgggttcggggaaa
acgcgttccttggtgactgcgatccgcgacctgctagaaaagcaagggcgccaattggtg
ctaacaggtcgaaaggtggcaataattacttacaccaacgctgcctgcgatgaaattaag
cagcggcttgaatttgaccctcgcattgatgtttctacaattcacagctttgcatggtcc
cttatccgaggctatgacgacgacattcgtagatggatcgatgcgcggttgcttgaagac
atcgccgaactcgaagaaaagcaaaagaagggacgcgctggcaaagccacgattgagcgc
gctcagtccatcgaaagcaagacgcggcgcagagccatgctcggggatatccagcgtttc
atctacagccccacgagtgacaacaggacacgcgacgccctcaatcatgctgaagtaata
gccatgacagccgatttcttgagccagaaaccagggctacgtcgccaacttgtgacgcgc
tatccagttctgcttattgatgaaagccaggatacgactaaacgcctgatggacgccttt
ctcttggtacaggaagcatttgctgaacagttttgcttagggctccttggcgatacgatg
cagcggatttatgcagacggtaaagttggtctagcagaagcaattccatcgacctgggcg
tttccccgcaaggttatgaatcatcgctgccccaaacgtgtcgttactctaattaacaag
atacgcgctgacgacgacgctcaggaacaaaaagcgcgaagcgatgcatcagaaggtttc
gttaggttgttcctcatttcagaaggtgtggccgacaaaaacgtgattgaagcgaaagcc
gcggcacagatggctcaactgactggcgatcaggcttgggctggtgaacatgctgatgtc
aaaacactggcgctcgagcacatgatgtcggcccgccgttttggtttcgaacgttttttt
gaaccgctctatggctatgagccaatacgaacgggcctgctcgatggttcaggccgtggc
ataggtttctttactcgcgaactcttgcctcttgcgcatgcgctgatgtcaaaagatcat
ttcggggtcgcgtcagcaactcgccgctcctctccgttgcttgatcgcagttttcttgct
gaagctggcaaagatcagaaagaagcccttaaggcagcaaagctggcatgtgacggcctt
tacgagcttttggtggacgagacgcctcctactctgcgaacaatcctgcgtcatgtcgct
caaaccaagttgttcgaaattccagatgttctcaaaccgttcgtacccgaaaatgacgag
gtgatcgaagaaggcgaggatgatgcaaagtctgagctgggagcatggcgaatggcgctg
gacgcaccctttcaggagattcaaaagtatgatcgctatgtgcgcggggtctctcagttc
gatacgcaccaaggcgtcaagggcctcgagtttccacgggttatggtaatcatcagtgat
gcagaggctcgtggcttcctcttcagctacggcaagctcatgggcaccaaagaaaagtca
aaagccgatttggataatgaggttgctggcaaggacaccagcatcgaccgcacccgccga
ctcttttacgtgacttgtagccgagcggaagaaagcttggccgtagtttactattcagat
gacccgacagcggcacgcgcagcaatccttgagcagggctggtttggcgagcaagaaatt
gaaattatgaccgcctaa
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