Yoonia rhodophyticola: AABB31_02995
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Entry
AABB31_02995 CDS
T10513
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
yrh Yoonia rhodophyticola
Pathway
yrh00300
Lysine biosynthesis
yrh00470
D-Amino acid metabolism
yrh01100
Metabolic pathways
yrh01110
Biosynthesis of secondary metabolites
yrh01120
Microbial metabolism in diverse environments
yrh01230
Biosynthesis of amino acids
Module
yrh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yrh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AABB31_02995 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AABB31_02995 (dapF)
Enzymes [BR:
yrh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AABB31_02995 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
XFU26469
UniProt:
A0ABZ3JCV5
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Position
2917471..2918286
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AA seq
271 aa
AA seq
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MDSQVSNTLPFMKMHGLGNDFVVVDERGAPPRVDAAIATRIADRHRGVGFDQLAVMSETE
NADIRLTFWNSDGSISGACGNATRCIARHLMDETGKTSVVIETARGLLQAKDAGGGQTSV
NMGQPQLDWADIPLAEAMDTLQLPIAGEPVATGMGNPHCTFFVPDADAVDLAARGAEMER
HPLFPARTNVQFASLIGPNRLRMRVWERGAGVTLASGSSSCATAVAAARRGLTGRDVQIM
LDGGTLSVQWAEDGVWMTGPTAHVFDGVWRG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggactcgcaggtttcgaatacgttgccctttatgaagatgcatgggcttggcaatgac
tttgtcgtggttgacgaaaggggcgcgccgcctcgcgtcgatgcggccatcgccacacgc
attgcggatcgccaccgtggcgtcgggtttgatcagctggcggtgatgtcagagaccgag
aatgcggatattcgactgacgttctggaatagcgacgggtctatctcgggcgcttgtggt
aacgcaacccgctgcatcgcgcgtcacttgatggatgagaccggcaagaccagcgttgtg
atcgagaccgcgcgggggcttcttcaggccaaagatgctggcggaggccagacatcagta
aatatggggcagccgcagcttgattgggccgacatacccttggctgaggcgatggatacg
cttcaactgccaatcgcaggcgaaccggtcgcaacgggcatgggcaacccacattgcaca
ttcttcgtgccggatgcggacgctgttgatctggccgcccgtggggccgaaatggaacga
catccgctgttcccggcgcgcacgaatgttcagtttgcgagcttgatcgggccgaaccgg
ttgcgcatgcgcgtttgggaaaggggggcgggtgtcaccttggcatcgggatcctcatct
tgtgcgacggcggttgccgcggcccggcgtggcctgacggggcgggatgtgcagatcatg
cttgatggcggcacgttgtcggtacagtgggccgaagatggcgtctggatgacggggccc
acggctcatgtgttcgacggtgtgtggcggggctga
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